Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 AC138649.2-201ENST00000615886 705 ntBASIC16.34■□□□□ 0.21
TLR9Q9NR96 AC006449.5-201ENST00000610658 2098 ntBASIC16.34■□□□□ 0.21
TLR9Q9NR96 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.34■□□□□ 0.21
TLR9Q9NR96 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TLR9Q9NR96 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
TLR9Q9NR96 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TLR9Q9NR96 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TLR9Q9NR96 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TLR9Q9NR96 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.34■□□□□ 0.21
TLR9Q9NR96 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TLR9Q9NR96 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TLR9Q9NR96 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TLR9Q9NR96 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
TLR9Q9NR96 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TLR9Q9NR96 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TLR9Q9NR96 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TLR9Q9NR96 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TLR9Q9NR96 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TLR9Q9NR96 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
TLR9Q9NR96 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.33■□□□□ 0.21
TLR9Q9NR96 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TLR9Q9NR96 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.33■□□□□ 0.2
TLR9Q9NR96 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TLR9Q9NR96 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TLR9Q9NR96 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TLR9Q9NR96 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TLR9Q9NR96 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.33■□□□□ 0.2
TLR9Q9NR96 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.33■□□□□ 0.2
TLR9Q9NR96 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.33■□□□□ 0.2
TLR9Q9NR96 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.33■□□□□ 0.2
TLR9Q9NR96 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
TLR9Q9NR96 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TLR9Q9NR96 COX5BP1-201ENST00000507622 393 ntBASIC16.33■□□□□ 0.2
TLR9Q9NR96 MIR4706-201ENST00000582134 82 ntBASIC16.33■□□□□ 0.2
TLR9Q9NR96 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.33■□□□□ 0.2
TLR9Q9NR96 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.33■□□□□ 0.2
TLR9Q9NR96 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.33■□□□□ 0.2
TLR9Q9NR96 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TLR9Q9NR96 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
TLR9Q9NR96 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TLR9Q9NR96 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TLR9Q9NR96 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TLR9Q9NR96 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.33■□□□□ 0.2
TLR9Q9NR96 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.33■□□□□ 0.2
TLR9Q9NR96 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TLR9Q9NR96 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TLR9Q9NR96 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TLR9Q9NR96 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.33■□□□□ 0.2
TLR9Q9NR96 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.33■□□□□ 0.2
TLR9Q9NR96 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.32■□□□□ 0.2
TLR9Q9NR96 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TLR9Q9NR96 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TLR9Q9NR96 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TLR9Q9NR96 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TLR9Q9NR96 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TLR9Q9NR96 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
TLR9Q9NR96 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TLR9Q9NR96 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TLR9Q9NR96 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TLR9Q9NR96 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TLR9Q9NR96 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TLR9Q9NR96 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.32■□□□□ 0.2
TLR9Q9NR96 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TLR9Q9NR96 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
TLR9Q9NR96 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TLR9Q9NR96 AL645937.2-201ENST00000396808 931 ntBASIC16.32■□□□□ 0.2
TLR9Q9NR96 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.32■□□□□ 0.2
TLR9Q9NR96 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TLR9Q9NR96 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.32■□□□□ 0.2
TLR9Q9NR96 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TLR9Q9NR96 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.32■□□□□ 0.2
TLR9Q9NR96 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TLR9Q9NR96 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TLR9Q9NR96 RN7SL769P-201ENST00000469386 295 ntBASIC16.32■□□□□ 0.2
TLR9Q9NR96 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TLR9Q9NR96 AC004066.1-201ENST00000502488 802 ntBASIC16.32■□□□□ 0.2
TLR9Q9NR96 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.32■□□□□ 0.2
TLR9Q9NR96 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.32■□□□□ 0.2
TLR9Q9NR96 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.32■□□□□ 0.2
TLR9Q9NR96 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.32■□□□□ 0.2
TLR9Q9NR96 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.32■□□□□ 0.2
TLR9Q9NR96 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.32■□□□□ 0.2
TLR9Q9NR96 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.32■□□□□ 0.2
TLR9Q9NR96 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.32■□□□□ 0.2
TLR9Q9NR96 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.32■□□□□ 0.2
TLR9Q9NR96 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.32■□□□□ 0.2
TLR9Q9NR96 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.32■□□□□ 0.2
TLR9Q9NR96 PPY2P-201ENST00000582808 702 ntBASIC16.32■□□□□ 0.2
TLR9Q9NR96 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TLR9Q9NR96 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TLR9Q9NR96 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.32■□□□□ 0.2
TLR9Q9NR96 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.32■□□□□ 0.2
TLR9Q9NR96 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.32■□□□□ 0.2
TLR9Q9NR96 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TLR9Q9NR96 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TLR9Q9NR96 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TLR9Q9NR96 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TLR9Q9NR96 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TLR9Q9NR96 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TLR9Q9NR96 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms