Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD248Q9HCU0 AC005252.3-201ENST00000623855 2258 ntBASIC16.39■□□□□ 0.21
CD248Q9HCU0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD248Q9HCU0 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD248Q9HCU0 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.39■□□□□ 0.21
CD248Q9HCU0 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD248Q9HCU0 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC16.39■□□□□ 0.21
CD248Q9HCU0 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD248Q9HCU0 AL365209.1-201ENST00000624418 6473 ntBASIC16.39■□□□□ 0.21
CD248Q9HCU0 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD248Q9HCU0 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD248Q9HCU0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.39■□□□□ 0.21
CD248Q9HCU0 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.39■□□□□ 0.21
CD248Q9HCU0 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.39■□□□□ 0.21
CD248Q9HCU0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.39■□□□□ 0.21
CD248Q9HCU0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.39■□□□□ 0.21
CD248Q9HCU0 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD248Q9HCU0 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.39■□□□□ 0.21
CD248Q9HCU0 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.39■□□□□ 0.21
CD248Q9HCU0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CD248Q9HCU0 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.39■□□□□ 0.21
CD248Q9HCU0 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD248Q9HCU0 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.39■□□□□ 0.21
CD248Q9HCU0 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD248Q9HCU0 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.39■□□□□ 0.21
CD248Q9HCU0 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.39■□□□□ 0.21
CD248Q9HCU0 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD248Q9HCU0 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD248Q9HCU0 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD248Q9HCU0 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CD248Q9HCU0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD248Q9HCU0 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CD248Q9HCU0 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD248Q9HCU0 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD248Q9HCU0 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD248Q9HCU0 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.39■□□□□ 0.21
CD248Q9HCU0 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD248Q9HCU0 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.39■□□□□ 0.21
CD248Q9HCU0 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CD248Q9HCU0 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CD248Q9HCU0 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD248Q9HCU0 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.39■□□□□ 0.21
CD248Q9HCU0 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CD248Q9HCU0 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CD248Q9HCU0 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.39■□□□□ 0.21
CD248Q9HCU0 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.39■□□□□ 0.21
CD248Q9HCU0 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD248Q9HCU0 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CD248Q9HCU0 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD248Q9HCU0 AL391825.1-201ENST00000457671 1364 ntBASIC16.38■□□□□ 0.21
CD248Q9HCU0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CD248Q9HCU0 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CD248Q9HCU0 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD248Q9HCU0 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CD248Q9HCU0 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD248Q9HCU0 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD248Q9HCU0 AC005912.2-201ENST00000619492 2400 ntBASIC16.38■□□□□ 0.21
CD248Q9HCU0 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD248Q9HCU0 AC138969.3-201ENST00000546612 1459 ntBASIC16.38■□□□□ 0.21
CD248Q9HCU0 AC138932.2-201ENST00000548268 1459 ntBASIC16.38■□□□□ 0.21
CD248Q9HCU0 AC126755.4-201ENST00000549796 1459 ntBASIC16.38■□□□□ 0.21
CD248Q9HCU0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD248Q9HCU0 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD248Q9HCU0 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CD248Q9HCU0 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD248Q9HCU0 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD248Q9HCU0 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
CD248Q9HCU0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD248Q9HCU0 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CD248Q9HCU0 DOC2GP-202ENST00000514950 1163 ntBASIC16.38■□□□□ 0.21
CD248Q9HCU0 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CD248Q9HCU0 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.38■□□□□ 0.21
CD248Q9HCU0 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.38■□□□□ 0.21
CD248Q9HCU0 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
CD248Q9HCU0 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD248Q9HCU0 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.38■□□□□ 0.21
CD248Q9HCU0 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.38■□□□□ 0.21
CD248Q9HCU0 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD248Q9HCU0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CD248Q9HCU0 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.38■□□□□ 0.21
CD248Q9HCU0 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD248Q9HCU0 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.38■□□□□ 0.21
CD248Q9HCU0 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD248Q9HCU0 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD248Q9HCU0 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.38■□□□□ 0.21
CD248Q9HCU0 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD248Q9HCU0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CD248Q9HCU0 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.38■□□□□ 0.21
CD248Q9HCU0 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.38■□□□□ 0.21
CD248Q9HCU0 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD248Q9HCU0 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD248Q9HCU0 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.37■□□□□ 0.21
CD248Q9HCU0 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD248Q9HCU0 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CD248Q9HCU0 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD248Q9HCU0 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD248Q9HCU0 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD248Q9HCU0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD248Q9HCU0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD248Q9HCU0 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms