Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 AC099548.2-209ENST00000480264 625 ntBASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 ECM1P1-201ENST00000604092 1279 ntBASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 AL606495.2-201ENST00000605867 535 ntBASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 AL157414.3-201ENST00000624276 1954 ntBASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 AL139094.1-201ENST00000405549 1188 ntBASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 KLF2P2-201ENST00000416807 1039 ntBASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 AC007969.1-201ENST00000433675 447 ntBASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 AC138951.2-201ENST00000623455 1161 ntBASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
KIAA1549Q9HCM3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 RNA5SP412-201ENST00000516234 123 ntBASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 LRRC59-203ENST00000576448 1531 ntBASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.66□□□□□ -0.22
KIAA1549Q9HCM3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
KIAA1549Q9HCM3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms