Protein–RNA interactions for Protein: Q9HBW1

LRRC4, Leucine-rich repeat-containing protein 4, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4Q9HBW1 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 AC098614.1-201ENST00000368528 745 ntBASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 AP005018.1-201ENST00000525475 301 ntBASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 AC133539.2-201ENST00000604757 467 ntBASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4Q9HBW1 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRRC4Q9HBW1 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRRC4Q9HBW1 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
LRRC4Q9HBW1 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.33■□□□□ 0.21
LRRC4Q9HBW1 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.33■□□□□ 0.21
LRRC4Q9HBW1 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LRRC4Q9HBW1 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.21
LRRC4Q9HBW1 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LRRC4Q9HBW1 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LRRC4Q9HBW1 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.33■□□□□ 0.21
LRRC4Q9HBW1 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC4Q9HBW1 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
LRRC4Q9HBW1 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC4Q9HBW1 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC4Q9HBW1 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC4Q9HBW1 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC4Q9HBW1 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.33■□□□□ 0.2
LRRC4Q9HBW1 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LRRC4Q9HBW1 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.33■□□□□ 0.2
LRRC4Q9HBW1 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC4Q9HBW1 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
LRRC4Q9HBW1 WFDC1-204ENST00000613603 549 ntBASIC16.33■□□□□ 0.2
LRRC4Q9HBW1 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.33■□□□□ 0.2
LRRC4Q9HBW1 AC105233.6-201ENST00000642093 218 ntBASIC16.33■□□□□ 0.2
LRRC4Q9HBW1 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC4Q9HBW1 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC4Q9HBW1 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
LRRC4Q9HBW1 DRD5P1-201ENST00000456605 1438 ntBASIC16.33■□□□□ 0.2
LRRC4Q9HBW1 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
LRRC4Q9HBW1 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC4Q9HBW1 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRC4Q9HBW1 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
LRRC4Q9HBW1 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
LRRC4Q9HBW1 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC4Q9HBW1 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRC4Q9HBW1 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LRRC4Q9HBW1 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC4Q9HBW1 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC4Q9HBW1 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC4Q9HBW1 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC4Q9HBW1 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
LRRC4Q9HBW1 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC4Q9HBW1 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
LRRC4Q9HBW1 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC4Q9HBW1 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC4Q9HBW1 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC4Q9HBW1 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms