Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.91□□□□□ -0.02
PIF1Q9H611 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.91□□□□□ -0.02
PIF1Q9H611 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.91□□□□□ -0.02
PIF1Q9H611 AP002472.1-201ENST00000577490 586 ntBASIC14.91□□□□□ -0.02
PIF1Q9H611 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.91□□□□□ -0.02
PIF1Q9H611 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.91□□□□□ -0.02
PIF1Q9H611 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.91□□□□□ -0.02
PIF1Q9H611 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.91□□□□□ -0.02
PIF1Q9H611 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIF1Q9H611 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PIF1Q9H611 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PIF1Q9H611 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIF1Q9H611 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.91□□□□□ -0.02
PIF1Q9H611 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIF1Q9H611 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIF1Q9H611 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
PIF1Q9H611 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PIF1Q9H611 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PIF1Q9H611 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.91□□□□□ -0.02
PIF1Q9H611 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PIF1Q9H611 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
PIF1Q9H611 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.91□□□□□ -0.02
PIF1Q9H611 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.91□□□□□ -0.02
PIF1Q9H611 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
PIF1Q9H611 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIF1Q9H611 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.91□□□□□ -0.02
PIF1Q9H611 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIF1Q9H611 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.91□□□□□ -0.02
PIF1Q9H611 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PIF1Q9H611 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PIF1Q9H611 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PIF1Q9H611 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PIF1Q9H611 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PIF1Q9H611 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PIF1Q9H611 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PIF1Q9H611 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PIF1Q9H611 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PIF1Q9H611 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.9□□□□□ -0.02
PIF1Q9H611 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.9□□□□□ -0.02
PIF1Q9H611 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PIF1Q9H611 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PIF1Q9H611 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PIF1Q9H611 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PIF1Q9H611 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PIF1Q9H611 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
PIF1Q9H611 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.9□□□□□ -0.02
PIF1Q9H611 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.9□□□□□ -0.02
PIF1Q9H611 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.9□□□□□ -0.02
PIF1Q9H611 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
PIF1Q9H611 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.9□□□□□ -0.02
PIF1Q9H611 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.9□□□□□ -0.02
PIF1Q9H611 AC105233.2-201ENST00000523697 349 ntBASIC14.9□□□□□ -0.02
PIF1Q9H611 AF228730.5-201ENST00000530288 346 ntBASIC14.9□□□□□ -0.02
PIF1Q9H611 PDPK2P-202ENST00000562415 1191 ntBASIC14.9□□□□□ -0.02
PIF1Q9H611 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PIF1Q9H611 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.9□□□□□ -0.02
PIF1Q9H611 AC073389.1-201ENST00000595595 795 ntBASIC14.9□□□□□ -0.02
PIF1Q9H611 AC099522.2-201ENST00000607001 744 ntBASIC14.9□□□□□ -0.02
PIF1Q9H611 AL513190.1-201ENST00000621254 727 ntBASIC14.9□□□□□ -0.02
PIF1Q9H611 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PIF1Q9H611 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PIF1Q9H611 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.9□□□□□ -0.02
PIF1Q9H611 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PIF1Q9H611 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.9□□□□□ -0.02
PIF1Q9H611 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.9□□□□□ -0.02
PIF1Q9H611 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
PIF1Q9H611 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PIF1Q9H611 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PIF1Q9H611 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PIF1Q9H611 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PIF1Q9H611 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PIF1Q9H611 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PIF1Q9H611 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
PIF1Q9H611 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 AC104581.4-201ENST00000623126 3052 ntBASIC14.89□□□□□ -0.03
PIF1Q9H611 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PIF1Q9H611 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
PIF1Q9H611 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
PIF1Q9H611 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PIF1Q9H611 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.89□□□□□ -0.03
PIF1Q9H611 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
PIF1Q9H611 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
PIF1Q9H611 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.89□□□□□ -0.03
PIF1Q9H611 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.89□□□□□ -0.03
PIF1Q9H611 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.89□□□□□ -0.03
PIF1Q9H611 AC002056.1-201ENST00000395613 760 ntBASIC14.89□□□□□ -0.03
PIF1Q9H611 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms