Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 AC117947.1-201ENST00000427448 529 ntBASIC12.63□□□□□ -0.39
NKX6-2Q9C056 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 KRT18P38-201ENST00000449496 1282 ntBASIC12.63□□□□□ -0.39
NKX6-2Q9C056 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 RPS15-207ENST00000591032 550 ntTSL 3 BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 RPS15-212ENST00000593052 629 ntTSL 2 BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 AL353135.1-201ENST00000606729 504 ntBASIC12.63□□□□□ -0.39
NKX6-2Q9C056 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 U82695.1-201ENST00000635752 1889 ntBASIC12.63□□□□□ -0.39
NKX6-2Q9C056 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 STARD13-205ENST00000439831 945 ntTSL 2 BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 AC011498.5-201ENST00000592027 486 ntBASIC12.62□□□□□ -0.39
NKX6-2Q9C056 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.62□□□□□ -0.39
NKX6-2Q9C056 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms