Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 C1QBPP1-201ENST00000400117 770 ntBASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 ACTBP11-201ENST00000436287 1126 ntBASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 AC012441.1-201ENST00000446669 685 ntBASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 AL355864.2-201ENST00000447420 863 ntBASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 CLUHP6-201ENST00000580789 941 ntBASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPAP1Q9BWH6 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 MIR1908-201ENST00000410394 80 ntBASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 VDAC1P7-201ENST00000462417 847 ntBASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 AC009486.1-201ENST00000569860 813 ntBASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 AL606495.2-201ENST00000605867 535 ntBASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 AC005252.2-201ENST00000624630 1141 ntBASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 AL121723.1-201ENST00000445194 1519 ntBASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 AC091951.1-201ENST00000512854 2465 ntBASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
RPAP1Q9BWH6 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPAP1Q9BWH6 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.72■□□□□ 0.59
RPAP1Q9BWH6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.72■□□□□ 0.59
RPAP1Q9BWH6 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPAP1Q9BWH6 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.72■□□□□ 0.59
RPAP1Q9BWH6 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPAP1Q9BWH6 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RPAP1Q9BWH6 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC18.72■□□□□ 0.59
RPAP1Q9BWH6 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.72■□□□□ 0.59
RPAP1Q9BWH6 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.72■□□□□ 0.59
RPAP1Q9BWH6 AC092933.1-201ENST00000393644 945 ntBASIC18.72■□□□□ 0.59
RPAP1Q9BWH6 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.72■□□□□ 0.59
RPAP1Q9BWH6 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
RPAP1Q9BWH6 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPAP1Q9BWH6 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.72■□□□□ 0.59
RPAP1Q9BWH6 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC18.72■□□□□ 0.59
RPAP1Q9BWH6 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.72■□□□□ 0.59
RPAP1Q9BWH6 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.72■□□□□ 0.59
RPAP1Q9BWH6 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.72■□□□□ 0.59
RPAP1Q9BWH6 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.72■□□□□ 0.59
RPAP1Q9BWH6 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC18.72■□□□□ 0.59
RPAP1Q9BWH6 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms