Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 AL118506.1-201ENST00000601296 3082 ntBASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 YBX2P1-201ENST00000394192 760 ntBASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 IGHV3-65-201ENST00000523210 341 ntBASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 AL691403.2-201ENST00000618460 490 ntBASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 AP001350.2-201ENST00000625104 1094 ntBASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 POM121L4P-202ENST00000427789 1891 ntBASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 VN2R19P-201ENST00000442399 1052 ntBASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 AC010654.1-201ENST00000615722 808 ntBASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.1□□□□□ -0.47
NDUFAF3Q9BU61 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms