Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 AL035456.1-201ENST00000456064 1369 ntBASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 KRT8P12-202ENST00000472924 1397 ntBASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC007326.2-201ENST00000624224 7579 ntBASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 CD82-202ENST00000342935 967 ntTSL 5 BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 CD81-202ENST00000381036 880 ntTSL 3 BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 PTK7-212ENST00000476760 902 ntTSL 2 BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 GATD1-206ENST00000526325 756 ntTSL 5 BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 KRT18P58-201ENST00000527480 1120 ntBASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC003101.2-201ENST00000612557 442 ntBASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 REXO1L2P-201ENST00000425429 2069 ntBASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 ELL2P1-201ENST00000413990 1906 ntBASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
SHANK2-AS3Q9BTD1 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 COCH-203ENST00000460581 2688 ntTSL 2 BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 ALG1L5P-201ENST00000482043 771 ntBASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 SLED1-202ENST00000512051 380 ntBASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 PGAM5P1-201ENST00000518923 814 ntBASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 PUS1-205ENST00000535067 838 ntTSL 3 BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 AL133215.2-201ENST00000609242 977 ntBASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC007967.4-201ENST00000614700 386 ntBASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SHANK2-AS3Q9BTD1 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SHANK2-AS3Q9BTD1 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
SHANK2-AS3Q9BTD1 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
SHANK2-AS3Q9BTD1 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
SHANK2-AS3Q9BTD1 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SHANK2-AS3Q9BTD1 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC11.96□□□□□ -0.5
SHANK2-AS3Q9BTD1 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SHANK2-AS3Q9BTD1 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
SHANK2-AS3Q9BTD1 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms