Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 FO393414.2-201ENST00000405153 598 ntBASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 CRB3P1-201ENST00000449338 276 ntBASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 DOC2GP-202ENST00000514950 1163 ntBASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 ZNF890P-202ENST00000530367 1156 ntBASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 AF228730.6-201ENST00000641497 218 ntBASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 AC084121.3-201ENST00000641716 218 ntBASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 AC105233.6-201ENST00000642093 218 ntBASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 AC134407.2-201ENST00000625089 1978 ntBASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 AP005117.1-202ENST00000581724 1908 ntBASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 TIMM17BP1-201ENST00000545713 516 ntBASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 BNIP3P1-202ENST00000550043 1585 ntBASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 AC004461.2-201ENST00000629517 803 ntBASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms