Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 AC152010.1-201ENST00000415779 2006 ntBASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 AP001267.2-201ENST00000532619 2086 ntBASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 MIR4515-201ENST00000584082 81 ntBASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 AC148477.8-201ENST00000624298 468 ntBASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP6Q96FZ7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 AC126335.2-201ENST00000623362 4637 ntBASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 HNRNPDP1-201ENST00000439535 754 ntBASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 FAAHP1-202ENST00000446499 1238 ntBASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.68■□□□□ 0.1
CHMP6Q96FZ7 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms