Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 HLA-J-204ENST00000495278 958 ntBASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 DUX4L47-201ENST00000566374 394 ntBASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 DUX4L46-201ENST00000566845 751 ntBASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 AC005332.8-201ENST00000622750 2735 ntBASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 OR2K2-202ENST00000374428 1038 ntBASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 AC138894.2-201ENST00000602838 371 ntBASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 AC242376.2-201ENST00000619355 883 ntBASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 SHC1P1-201ENST00000425230 1745 ntBASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 AC012313.1-201ENST00000593393 3059 ntBASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM43Q96BQ3 AC084364.1-201ENST00000551967 1556 ntBASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 AC074138.1-201ENST00000611182 1303 ntBASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 RN7SKP175-201ENST00000408472 289 ntBASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 RPS9P1-201ENST00000419943 583 ntBASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 AC097065.1-201ENST00000425737 517 ntBASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 HLA-K-203ENST00000430151 1046 ntBASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 DNM1P30-201ENST00000563586 452 ntBASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 AC002472.3-201ENST00000640124 621 ntBASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 AC025271.4-201ENST00000621477 1726 ntBASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM43Q96BQ3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM43Q96BQ3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms