Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 YBX1P5-201ENST00000509441 847 ntBASIC17.54■□□□□ 0.4
SMARCE1Q969G3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 RN7SL828P-201ENST00000607615 303 ntBASIC17.54■□□□□ 0.4
SMARCE1Q969G3 AL133215.2-201ENST00000609242 977 ntBASIC17.54■□□□□ 0.4
SMARCE1Q969G3 AC007967.4-201ENST00000614700 386 ntBASIC17.54■□□□□ 0.4
SMARCE1Q969G3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.54■□□□□ 0.4
SMARCE1Q969G3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 ZBED1P1-201ENST00000502364 1930 ntBASIC17.53■□□□□ 0.4
SMARCE1Q969G3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 MTND6P24-201ENST00000440466 518 ntBASIC17.53■□□□□ 0.4
SMARCE1Q969G3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 SPDYE14P-201ENST00000442619 822 ntBASIC17.53■□□□□ 0.4
SMARCE1Q969G3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SMARCE1Q969G3 AL035456.1-201ENST00000456064 1369 ntBASIC17.53■□□□□ 0.4
SMARCE1Q969G3 KRT8P12-202ENST00000472924 1397 ntBASIC17.53■□□□□ 0.4
SMARCE1Q969G3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCE1Q969G3 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCE1Q969G3 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCE1Q969G3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCE1Q969G3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCE1Q969G3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCE1Q969G3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCE1Q969G3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SMARCE1Q969G3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCE1Q969G3 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SMARCE1Q969G3 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCE1Q969G3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCE1Q969G3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCE1Q969G3 TARDBPP1-201ENST00000442013 1203 ntBASIC17.52■□□□□ 0.4
SMARCE1Q969G3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SMARCE1Q969G3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.52■□□□□ 0.4
SMARCE1Q969G3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.52■□□□□ 0.4
SMARCE1Q969G3 AC026150.2-201ENST00000564693 1156 ntBASIC17.52■□□□□ 0.4
SMARCE1Q969G3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.52■□□□□ 0.4
SMARCE1Q969G3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.52■□□□□ 0.4
SMARCE1Q969G3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCE1Q969G3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
SMARCE1Q969G3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.52■□□□□ 0.4
SMARCE1Q969G3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.52■□□□□ 0.4
SMARCE1Q969G3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCE1Q969G3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCE1Q969G3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.52■□□□□ 0.4
SMARCE1Q969G3 AC139749.1-202ENST00000617529 3139 ntBASIC17.52■□□□□ 0.4
SMARCE1Q969G3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SMARCE1Q969G3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
SMARCE1Q969G3 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCE1Q969G3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
SMARCE1Q969G3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SMARCE1Q969G3 MROH4P-201ENST00000431302 1578 ntBASIC17.52■□□□□ 0.39
SMARCE1Q969G3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SMARCE1Q969G3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
SMARCE1Q969G3 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMARCE1Q969G3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMARCE1Q969G3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMARCE1Q969G3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms