Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNED1Q8TER0 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.51■□□□□ 0.55
SNED1Q8TER0 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNED1Q8TER0 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.51■□□□□ 0.55
SNED1Q8TER0 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SNED1Q8TER0 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.51■□□□□ 0.55
SNED1Q8TER0 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC18.51■□□□□ 0.55
SNED1Q8TER0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SNED1Q8TER0 AL157791.1-201ENST00000553667 1699 ntBASIC18.5■□□□□ 0.55
SNED1Q8TER0 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNED1Q8TER0 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNED1Q8TER0 RBM38-204ENST00000371219 760 ntTSL 2 BASIC18.5■□□□□ 0.55
SNED1Q8TER0 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC18.5■□□□□ 0.55
SNED1Q8TER0 AL353637.1-201ENST00000451571 732 ntBASIC18.5■□□□□ 0.55
SNED1Q8TER0 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC18.5■□□□□ 0.55
SNED1Q8TER0 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC18.5■□□□□ 0.55
SNED1Q8TER0 AC132192.2-201ENST00000596206 1147 ntBASIC18.5■□□□□ 0.55
SNED1Q8TER0 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC18.5■□□□□ 0.55
SNED1Q8TER0 MEG3_2.1-201ENST00000611456 105 ntBASIC18.5■□□□□ 0.55
SNED1Q8TER0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.5■□□□□ 0.55
SNED1Q8TER0 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNED1Q8TER0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.5■□□□□ 0.55
SNED1Q8TER0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNED1Q8TER0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SNED1Q8TER0 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNED1Q8TER0 E2F3P2-201ENST00000447755 1422 ntBASIC18.5■□□□□ 0.55
SNED1Q8TER0 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNED1Q8TER0 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SNED1Q8TER0 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SNED1Q8TER0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SNED1Q8TER0 AC010491.1-201ENST00000563101 2797 ntBASIC18.5■□□□□ 0.55
SNED1Q8TER0 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SNED1Q8TER0 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC18.5■□□□□ 0.55
SNED1Q8TER0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SNED1Q8TER0 SHC1P1-201ENST00000425230 1745 ntBASIC18.5■□□□□ 0.55
SNED1Q8TER0 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNED1Q8TER0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNED1Q8TER0 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNED1Q8TER0 INE2-201ENST00000630399 1874 ntBASIC18.5■□□□□ 0.55
SNED1Q8TER0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SNED1Q8TER0 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNED1Q8TER0 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNED1Q8TER0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNED1Q8TER0 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNED1Q8TER0 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNED1Q8TER0 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNED1Q8TER0 AC026316.1-201ENST00000398900 414 ntBASIC18.49■□□□□ 0.55
SNED1Q8TER0 RPSAP31-201ENST00000416648 895 ntBASIC18.49■□□□□ 0.55
SNED1Q8TER0 AC098935.1-201ENST00000446057 611 ntBASIC18.49■□□□□ 0.55
SNED1Q8TER0 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC18.49■□□□□ 0.55
SNED1Q8TER0 CFL1-206ENST00000527344 962 ntTSL 2 BASIC18.49■□□□□ 0.55
SNED1Q8TER0 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNED1Q8TER0 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
SNED1Q8TER0 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC18.49■□□□□ 0.55
SNED1Q8TER0 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SNED1Q8TER0 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC18.49■□□□□ 0.55
SNED1Q8TER0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNED1Q8TER0 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNED1Q8TER0 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SNED1Q8TER0 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNED1Q8TER0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SNED1Q8TER0 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNED1Q8TER0 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SNED1Q8TER0 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SNED1Q8TER0 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNED1Q8TER0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNED1Q8TER0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNED1Q8TER0 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNED1Q8TER0 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNED1Q8TER0 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNED1Q8TER0 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNED1Q8TER0 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC18.49■□□□□ 0.55
SNED1Q8TER0 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNED1Q8TER0 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC18.49■□□□□ 0.55
SNED1Q8TER0 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC18.49■□□□□ 0.55
SNED1Q8TER0 RPL18P13-201ENST00000478088 569 ntBASIC18.49■□□□□ 0.55
SNED1Q8TER0 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC18.49■□□□□ 0.55
SNED1Q8TER0 RCC2P8-201ENST00000502779 1035 ntBASIC18.49■□□□□ 0.55
SNED1Q8TER0 RTN3P1-201ENST00000536295 711 ntBASIC18.49■□□□□ 0.55
SNED1Q8TER0 MIR4750-201ENST00000584564 56 ntBASIC18.49■□□□□ 0.55
SNED1Q8TER0 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNED1Q8TER0 RN7SL736P-201ENST00000613111 269 ntBASIC18.49■□□□□ 0.55
SNED1Q8TER0 AL353726.2-201ENST00000623259 884 ntBASIC18.49■□□□□ 0.55
SNED1Q8TER0 AC002472.3-201ENST00000640124 621 ntBASIC18.49■□□□□ 0.55
SNED1Q8TER0 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SNED1Q8TER0 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SNED1Q8TER0 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SNED1Q8TER0 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC18.48■□□□□ 0.55
SNED1Q8TER0 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNED1Q8TER0 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SNED1Q8TER0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNED1Q8TER0 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SNED1Q8TER0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNED1Q8TER0 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.48■□□□□ 0.55
SNED1Q8TER0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.48■□□□□ 0.55
SNED1Q8TER0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNED1Q8TER0 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNED1Q8TER0 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SNED1Q8TER0 AL391005.1-201ENST00000623953 2435 ntBASIC18.48■□□□□ 0.55
SNED1Q8TER0 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms