Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LMO3Q8TAP4 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
LMO3Q8TAP4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.52■□□□□ 0.24
LMO3Q8TAP4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LMO3Q8TAP4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LMO3Q8TAP4 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.52■□□□□ 0.24
LMO3Q8TAP4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
LMO3Q8TAP4 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.52■□□□□ 0.24
LMO3Q8TAP4 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LMO3Q8TAP4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.52■□□□□ 0.24
LMO3Q8TAP4 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
LMO3Q8TAP4 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.52■□□□□ 0.24
LMO3Q8TAP4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LMO3Q8TAP4 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
LMO3Q8TAP4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LMO3Q8TAP4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LMO3Q8TAP4 API5-211ENST00000534695 560 ntTSL 5 BASIC16.52■□□□□ 0.24
LMO3Q8TAP4 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.52■□□□□ 0.24
LMO3Q8TAP4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LMO3Q8TAP4 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.52■□□□□ 0.24
LMO3Q8TAP4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LMO3Q8TAP4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.52■□□□□ 0.24
LMO3Q8TAP4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LMO3Q8TAP4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.52■□□□□ 0.23
LMO3Q8TAP4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
LMO3Q8TAP4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LMO3Q8TAP4 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LMO3Q8TAP4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
LMO3Q8TAP4 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LMO3Q8TAP4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.52■□□□□ 0.23
LMO3Q8TAP4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 LILRP1-201ENST00000444199 1370 ntBASIC16.51■□□□□ 0.23
LMO3Q8TAP4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 AC002472.2-201ENST00000442739 958 ntBASIC16.51■□□□□ 0.23
LMO3Q8TAP4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 AC092552.1-201ENST00000547243 906 ntBASIC16.51■□□□□ 0.23
LMO3Q8TAP4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 AC124283.3-201ENST00000570869 594 ntBASIC16.51■□□□□ 0.23
LMO3Q8TAP4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 AL132655.2-201ENST00000596276 594 ntBASIC16.51■□□□□ 0.23
LMO3Q8TAP4 AC093726.1-201ENST00000608064 963 ntBASIC16.51■□□□□ 0.23
LMO3Q8TAP4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 AC008761.3-201ENST00000624803 892 ntBASIC16.51■□□□□ 0.23
LMO3Q8TAP4 PRSS30P-206ENST00000641773 873 ntBASIC16.51■□□□□ 0.23
LMO3Q8TAP4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 AL158070.2-201ENST00000623713 1621 ntBASIC16.51■□□□□ 0.23
LMO3Q8TAP4 AC099063.4-201ENST00000641099 1602 ntBASIC16.51■□□□□ 0.23
LMO3Q8TAP4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 CICP14-201ENST00000629111 2732 ntBASIC16.51■□□□□ 0.23
LMO3Q8TAP4 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.51■□□□□ 0.23
LMO3Q8TAP4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 REXO1L5P-201ENST00000622260 2098 ntBASIC16.5■□□□□ 0.23
LMO3Q8TAP4 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 AL390755.1-201ENST00000623716 2027 ntBASIC16.5■□□□□ 0.23
LMO3Q8TAP4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 AC007541.1-201ENST00000570282 1469 ntBASIC16.5■□□□□ 0.23
LMO3Q8TAP4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.5■□□□□ 0.23
LMO3Q8TAP4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms