Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 REXO1L4P-201ENST00000605109 1937 ntBASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 AC008741.2-201ENST00000612792 3115 ntBASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 CD8B2-202ENST00000417670 633 ntBASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 AL583810.1-201ENST00000553344 1045 ntBASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 AL033527.4-201ENST00000641026 673 ntBASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 MST1L-201ENST00000442552 2185 ntBASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
NEDD1Q8NHV4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 AC012508.2-201ENST00000567613 1472 ntBASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 AC126365.1-201ENST00000578585 1514 ntBASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 AL590640.2-201ENST00000457038 527 ntBASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 ENPP7P14-201ENST00000621765 1040 ntBASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 AC138951.2-201ENST00000623455 1161 ntBASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 AC006453.4-201ENST00000636949 1252 ntBASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NEDD1Q8NHV4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.89■□□□□ 0.46
NEDD1Q8NHV4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
NEDD1Q8NHV4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
NEDD1Q8NHV4 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms