Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 MIR600HG-201ENST00000449175 5984 ntBASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 PPT1-215ENST00000641471 2368 ntBASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 C18orf15-201ENST00000623680 2534 ntBASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 AC123567.1-201ENST00000548294 1261 ntBASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 AC190387.1-201ENST00000551683 408 ntBASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 AL645728.2-202ENST00000641679 227 ntBASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 AC112693.3-201ENST00000624819 1983 ntBASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC148Q8NFR7 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 API5-211ENST00000534695 560 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 AC140912.1-201ENST00000577171 1054 ntBASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 AL049840.4-201ENST00000602422 811 ntBASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 AC007431.3-201ENST00000623221 587 ntBASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC148Q8NFR7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms