Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 MIR346-201ENST00000362234 95 ntBASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 RPS8P6-201ENST00000426177 609 ntBASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 FAM58CP-201ENST00000435741 640 ntBASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 ACTG1P14-201ENST00000446382 1122 ntBASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 AC040169.1-201ENST00000565382 521 ntBASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 AC092902.6-201ENST00000641783 218 ntBASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DNAAF1Q8NEP3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 HLA-H-201ENST00000383620 1096 ntBASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 ADH5P3-201ENST00000433842 1137 ntBASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 AC026120.1-201ENST00000611536 926 ntBASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms