Protein–RNA interactions for Protein: Q8N5C6

SRBD1, S1 RNA-binding domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 995 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRBD1Q8N5C6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 AP001063.1-201ENST00000568332 529 ntBASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 AL035252.4-201ENST00000624174 288 ntBASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.8■□□□□ 0.44
SRBD1Q8N5C6 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 AL157414.3-201ENST00000624276 1954 ntBASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 RNU1-114P-201ENST00000365297 166 ntBASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 ACKR1-201ENST00000368121 1240 ntBASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 AC005034.1-201ENST00000426657 489 ntBASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 AC007389.4-201ENST00000454674 793 ntBASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 AC023157.3-201ENST00000619086 2088 ntBASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SRBD1Q8N5C6 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRBD1Q8N5C6 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRBD1Q8N5C6 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRBD1Q8N5C6 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRBD1Q8N5C6 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.78■□□□□ 0.44
SRBD1Q8N5C6 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRBD1Q8N5C6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRBD1Q8N5C6 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRBD1Q8N5C6 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRBD1Q8N5C6 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRBD1Q8N5C6 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.78■□□□□ 0.44
SRBD1Q8N5C6 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRBD1Q8N5C6 REXO1L2P-201ENST00000425429 2069 ntBASIC17.78■□□□□ 0.44
SRBD1Q8N5C6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SRBD1Q8N5C6 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRBD1Q8N5C6 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRBD1Q8N5C6 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.78■□□□□ 0.44
SRBD1Q8N5C6 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.78■□□□□ 0.44
SRBD1Q8N5C6 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRBD1Q8N5C6 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRBD1Q8N5C6 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRBD1Q8N5C6 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SRBD1Q8N5C6 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.78■□□□□ 0.44
SRBD1Q8N5C6 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRBD1Q8N5C6 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms