Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC21.35■■□□□ 1.01
UBR1Q8IWV7 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UBR1Q8IWV7 NEU3-207ENST00000534628 746 ntTSL 2 BASIC21.35■■□□□ 1.01
UBR1Q8IWV7 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC21.35■■□□□ 1.01
UBR1Q8IWV7 AL022334.2-201ENST00000610000 484 ntBASIC21.35■■□□□ 1.01
UBR1Q8IWV7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBR1Q8IWV7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC21.35■■□□□ 1.01
UBR1Q8IWV7 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBR1Q8IWV7 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
UBR1Q8IWV7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBR1Q8IWV7 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UBR1Q8IWV7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
UBR1Q8IWV7 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UBR1Q8IWV7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBR1Q8IWV7 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC21.35■■□□□ 1.01
UBR1Q8IWV7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UBR1Q8IWV7 HIST2H2BA-201ENST00000412169 381 ntBASIC21.35■■□□□ 1.01
UBR1Q8IWV7 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC21.35■■□□□ 1.01
UBR1Q8IWV7 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC21.35■■□□□ 1.01
UBR1Q8IWV7 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC21.35■■□□□ 1.01
UBR1Q8IWV7 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UBR1Q8IWV7 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC21.35■■□□□ 1.01
UBR1Q8IWV7 REEP5-205ENST00000504247 480 ntTSL 5 BASIC21.35■■□□□ 1.01
UBR1Q8IWV7 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC21.35■■□□□ 1.01
UBR1Q8IWV7 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UBR1Q8IWV7 NUDT4P2-201ENST00000578341 546 ntBASIC21.35■■□□□ 1.01
UBR1Q8IWV7 RPS15-202ENST00000585665 467 ntTSL 3 BASIC21.35■■□□□ 1.01
UBR1Q8IWV7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.34■■□□□ 1.01
UBR1Q8IWV7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC21.34■■□□□ 1.01
UBR1Q8IWV7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBR1Q8IWV7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBR1Q8IWV7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBR1Q8IWV7 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC21.34■■□□□ 1.01
UBR1Q8IWV7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
UBR1Q8IWV7 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBR1Q8IWV7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBR1Q8IWV7 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBR1Q8IWV7 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
UBR1Q8IWV7 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
UBR1Q8IWV7 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC21.34■■□□□ 1.01
UBR1Q8IWV7 AL807761.2-201ENST00000422849 729 ntBASIC21.34■■□□□ 1.01
UBR1Q8IWV7 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC21.34■■□□□ 1.01
UBR1Q8IWV7 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
UBR1Q8IWV7 PSMD4P1-201ENST00000433951 1109 ntBASIC21.34■■□□□ 1.01
UBR1Q8IWV7 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC21.34■■□□□ 1.01
UBR1Q8IWV7 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC21.34■■□□□ 1.01
UBR1Q8IWV7 RPSAP15-201ENST00000448168 861 ntBASIC21.34■■□□□ 1.01
UBR1Q8IWV7 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC21.34■■□□□ 1.01
UBR1Q8IWV7 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC21.34■■□□□ 1.01
UBR1Q8IWV7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC21.34■■□□□ 1.01
UBR1Q8IWV7 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
UBR1Q8IWV7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
UBR1Q8IWV7 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
UBR1Q8IWV7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.34■■□□□ 1.01
UBR1Q8IWV7 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC21.33■■□□□ 1.01
UBR1Q8IWV7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
UBR1Q8IWV7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
UBR1Q8IWV7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
UBR1Q8IWV7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
UBR1Q8IWV7 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
UBR1Q8IWV7 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC21.33■■□□□ 1.01
UBR1Q8IWV7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
UBR1Q8IWV7 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
UBR1Q8IWV7 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
UBR1Q8IWV7 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC21.33■■□□□ 1.01
UBR1Q8IWV7 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC21.33■■□□□ 1.01
UBR1Q8IWV7 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC21.33■■□□□ 1.01
UBR1Q8IWV7 AC087392.5-201ENST00000612517 489 ntBASIC21.33■■□□□ 1.01
UBR1Q8IWV7 LINC01783-202ENST00000614408 828 ntBASIC21.33■■□□□ 1.01
UBR1Q8IWV7 BX284668.2-205ENST00000619677 828 ntBASIC21.33■■□□□ 1.01
UBR1Q8IWV7 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC21.33■■□□□ 1.01
UBR1Q8IWV7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
UBR1Q8IWV7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC21.33■■□□□ 1
UBR1Q8IWV7 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC21.33■■□□□ 1
UBR1Q8IWV7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
UBR1Q8IWV7 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
UBR1Q8IWV7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC21.33■■□□□ 1
UBR1Q8IWV7 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC21.33■■□□□ 1
UBR1Q8IWV7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC21.33■■□□□ 1
UBR1Q8IWV7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC21.33■■□□□ 1
UBR1Q8IWV7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBR1Q8IWV7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBR1Q8IWV7 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC21.32■■□□□ 1
UBR1Q8IWV7 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBR1Q8IWV7 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
UBR1Q8IWV7 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC21.32■■□□□ 1
UBR1Q8IWV7 TSPY25P-201ENST00000429463 745 ntBASIC21.32■■□□□ 1
UBR1Q8IWV7 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC21.32■■□□□ 1
UBR1Q8IWV7 GCOM2-201ENST00000509133 1104 ntBASIC21.32■■□□□ 1
UBR1Q8IWV7 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC21.32■■□□□ 1
UBR1Q8IWV7 AC093752.3-201ENST00000567343 901 ntBASIC21.32■■□□□ 1
UBR1Q8IWV7 AC009145.4-201ENST00000625119 1294 ntBASIC21.32■■□□□ 1
UBR1Q8IWV7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
UBR1Q8IWV7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
UBR1Q8IWV7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC21.32■■□□□ 1
UBR1Q8IWV7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC21.32■■□□□ 1
UBR1Q8IWV7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBR1Q8IWV7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
UBR1Q8IWV7 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC21.32■■□□□ 1
UBR1Q8IWV7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms