Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TRIM50Q86XT4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 PCDHA1-201ENST00000378133 2726 ntBASIC17.23■□□□□ 0.35
TRIM50Q86XT4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 AL355994.2-201ENST00000447882 704 ntBASIC17.23■□□□□ 0.35
TRIM50Q86XT4 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 AC078819.1-201ENST00000547454 765 ntBASIC17.23■□□□□ 0.35
TRIM50Q86XT4 AC012085.1-201ENST00000548270 765 ntBASIC17.23■□□□□ 0.35
TRIM50Q86XT4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 RN7SL219P-201ENST00000582872 296 ntBASIC17.23■□□□□ 0.35
TRIM50Q86XT4 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.23■□□□□ 0.35
TRIM50Q86XT4 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 AC084364.1-201ENST00000551967 1556 ntBASIC17.23■□□□□ 0.35
TRIM50Q86XT4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRIM50Q86XT4 AC148477.4-201ENST00000613430 1793 ntBASIC17.23■□□□□ 0.35
TRIM50Q86XT4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 KLF2P2-201ENST00000416807 1039 ntBASIC17.22■□□□□ 0.35
TRIM50Q86XT4 CNN2P8-201ENST00000421872 913 ntBASIC17.22■□□□□ 0.35
TRIM50Q86XT4 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 AC138951.2-201ENST00000623455 1161 ntBASIC17.22■□□□□ 0.35
TRIM50Q86XT4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms