Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 AC136759.1-202ENST00000530858 2194 ntBASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 AC005740.2-201ENST00000511085 419 ntBASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 AL118516.1-201ENST00000564152 670 ntBASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 AC009779.1-201ENST00000551138 283 ntBASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 MIR5196-201ENST00000578146 115 ntBASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 AL513523.2-202ENST00000427283 2040 ntBASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 REXO1L4P-201ENST00000605109 1937 ntBASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 AC073150.1-201ENST00000450406 1084 ntBASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 PPOX-204ENST00000462866 473 ntTSL 5 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 EID1-202ENST00000560490 584 ntTSL 3 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 AL157813.1-201ENST00000612996 587 ntBASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 AC103691.2-201ENST00000618824 433 ntBASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC9.32□□□□□ -0.92
VPS13BQ7Z7G8 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 AL357563.1-201ENST00000404728 395 ntBASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 AMT-204ENST00000427987 1646 ntTSL 5 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 ACE-203ENST00000413513 2237 ntTSL 2 BASIC9.31□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms