Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.1□□□□□ -0.15
SHFQ7M4L6 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SHFQ7M4L6 AC026979.3-201ENST00000607315 403 ntBASIC14.1□□□□□ -0.15
SHFQ7M4L6 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.1□□□□□ -0.15
SHFQ7M4L6 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHFQ7M4L6 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.1□□□□□ -0.15
SHFQ7M4L6 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.1□□□□□ -0.15
SHFQ7M4L6 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SHFQ7M4L6 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHFQ7M4L6 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
SHFQ7M4L6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHFQ7M4L6 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHFQ7M4L6 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHFQ7M4L6 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHFQ7M4L6 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHFQ7M4L6 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHFQ7M4L6 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHFQ7M4L6 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SHFQ7M4L6 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHFQ7M4L6 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SHFQ7M4L6 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHFQ7M4L6 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHFQ7M4L6 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHFQ7M4L6 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SHFQ7M4L6 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SHFQ7M4L6 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHFQ7M4L6 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.1□□□□□ -0.15
SHFQ7M4L6 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SHFQ7M4L6 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHFQ7M4L6 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
SHFQ7M4L6 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHFQ7M4L6 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.09□□□□□ -0.15
SHFQ7M4L6 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHFQ7M4L6 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.09□□□□□ -0.15
SHFQ7M4L6 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHFQ7M4L6 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHFQ7M4L6 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHFQ7M4L6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.09□□□□□ -0.15
SHFQ7M4L6 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.09□□□□□ -0.15
SHFQ7M4L6 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SHFQ7M4L6 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SHFQ7M4L6 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHFQ7M4L6 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SHFQ7M4L6 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.09□□□□□ -0.15
SHFQ7M4L6 CICP11-201ENST00000434745 2827 ntBASIC14.09□□□□□ -0.15
SHFQ7M4L6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHFQ7M4L6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.09□□□□□ -0.15
SHFQ7M4L6 FAM58CP-201ENST00000435741 640 ntBASIC14.09□□□□□ -0.15
SHFQ7M4L6 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.09□□□□□ -0.15
SHFQ7M4L6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.09□□□□□ -0.15
SHFQ7M4L6 SPDYE11-202ENST00000450699 704 ntBASIC14.09□□□□□ -0.15
SHFQ7M4L6 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.09□□□□□ -0.15
SHFQ7M4L6 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.09□□□□□ -0.15
SHFQ7M4L6 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.09□□□□□ -0.15
SHFQ7M4L6 IGHV3-62-201ENST00000520057 340 ntBASIC14.09□□□□□ -0.15
SHFQ7M4L6 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SHFQ7M4L6 KRT8P23-201ENST00000560090 1207 ntBASIC14.09□□□□□ -0.15
SHFQ7M4L6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.09□□□□□ -0.15
SHFQ7M4L6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.09□□□□□ -0.15
SHFQ7M4L6 SPDYE9P-201ENST00000570642 692 ntBASIC14.09□□□□□ -0.15
SHFQ7M4L6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SHFQ7M4L6 SPDYE10P-202ENST00000612005 668 ntBASIC14.09□□□□□ -0.15
SHFQ7M4L6 SPDYE8P-202ENST00000612377 668 ntBASIC14.09□□□□□ -0.15
SHFQ7M4L6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.09□□□□□ -0.15
SHFQ7M4L6 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.09□□□□□ -0.15
SHFQ7M4L6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SHFQ7M4L6 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.09□□□□□ -0.15
SHFQ7M4L6 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHFQ7M4L6 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SHFQ7M4L6 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
SHFQ7M4L6 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHFQ7M4L6 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
SHFQ7M4L6 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHFQ7M4L6 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.09□□□□□ -0.15
SHFQ7M4L6 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SHFQ7M4L6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.09□□□□□ -0.15
SHFQ7M4L6 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
SHFQ7M4L6 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.09□□□□□ -0.15
SHFQ7M4L6 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SHFQ7M4L6 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SHFQ7M4L6 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SHFQ7M4L6 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SHFQ7M4L6 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.08□□□□□ -0.15
SHFQ7M4L6 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
SHFQ7M4L6 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.08□□□□□ -0.15
SHFQ7M4L6 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SHFQ7M4L6 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHFQ7M4L6 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHFQ7M4L6 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.08□□□□□ -0.16
SHFQ7M4L6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHFQ7M4L6 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHFQ7M4L6 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.08□□□□□ -0.16
SHFQ7M4L6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHFQ7M4L6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHFQ7M4L6 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.08□□□□□ -0.16
SHFQ7M4L6 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHFQ7M4L6 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.08□□□□□ -0.16
SHFQ7M4L6 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.08□□□□□ -0.16
SHFQ7M4L6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHFQ7M4L6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms