Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RAPH1Q70E73 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAPH1Q70E73 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAPH1Q70E73 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RAPH1Q70E73 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RAPH1Q70E73 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.66■□□□□ 0.1
RAPH1Q70E73 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RAPH1Q70E73 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RAPH1Q70E73 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.66■□□□□ 0.1
RAPH1Q70E73 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.66■□□□□ 0.1
RAPH1Q70E73 AC004832.2-201ENST00000426397 482 ntBASIC15.66■□□□□ 0.1
RAPH1Q70E73 AC005237.2-201ENST00000434368 219 ntBASIC15.66■□□□□ 0.1
RAPH1Q70E73 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RAPH1Q70E73 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.66■□□□□ 0.1
RAPH1Q70E73 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.66■□□□□ 0.1
RAPH1Q70E73 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RAPH1Q70E73 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RAPH1Q70E73 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RAPH1Q70E73 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 AL607033.1-201ENST00000623900 1599 ntBASIC15.66■□□□□ 0.1
RAPH1Q70E73 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAPH1Q70E73 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RAPH1Q70E73 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RAPH1Q70E73 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAPH1Q70E73 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAPH1Q70E73 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAPH1Q70E73 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAPH1Q70E73 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RAPH1Q70E73 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAPH1Q70E73 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAPH1Q70E73 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAPH1Q70E73 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RAPH1Q70E73 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RAPH1Q70E73 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAPH1Q70E73 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RAPH1Q70E73 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAPH1Q70E73 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAPH1Q70E73 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAPH1Q70E73 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAPH1Q70E73 AZGP1P1-201ENST00000411909 902 ntBASIC15.65■□□□□ 0.1
RAPH1Q70E73 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.65■□□□□ 0.1
RAPH1Q70E73 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.65■□□□□ 0.1
RAPH1Q70E73 CEND1P1-201ENST00000451006 455 ntBASIC15.65■□□□□ 0.1
RAPH1Q70E73 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.65■□□□□ 0.1
RAPH1Q70E73 ALG1L5P-201ENST00000482043 771 ntBASIC15.65■□□□□ 0.1
RAPH1Q70E73 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.65■□□□□ 0.1
RAPH1Q70E73 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.65■□□□□ 0.1
RAPH1Q70E73 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
RAPH1Q70E73 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.65■□□□□ 0.1
RAPH1Q70E73 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.65■□□□□ 0.1
RAPH1Q70E73 AC097359.3-201ENST00000603982 1210 ntBASIC15.65■□□□□ 0.1
RAPH1Q70E73 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RAPH1Q70E73 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.65■□□□□ 0.1
RAPH1Q70E73 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.65■□□□□ 0.1
RAPH1Q70E73 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.65■□□□□ 0.1
RAPH1Q70E73 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAPH1Q70E73 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAPH1Q70E73 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAPH1Q70E73 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RAPH1Q70E73 GRK6P1-201ENST00000400595 1711 ntBASIC15.65■□□□□ 0.1
RAPH1Q70E73 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAPH1Q70E73 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAPH1Q70E73 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.65■□□□□ 0.1
RAPH1Q70E73 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAPH1Q70E73 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAPH1Q70E73 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
RAPH1Q70E73 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAPH1Q70E73 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms