Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 AC018892.3-201ENST00000623986 2499 ntBASIC14.03□□□□□ -0.16
RTL6Q6ICC9 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 AC134915.1-201ENST00000426461 574 ntBASIC14.03□□□□□ -0.16
RTL6Q6ICC9 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 AP005482.1-201ENST00000563722 1273 ntBASIC14.03□□□□□ -0.16
RTL6Q6ICC9 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 INTS4P2-202ENST00000614726 2019 ntBASIC14.03□□□□□ -0.16
RTL6Q6ICC9 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTL6Q6ICC9 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.02□□□□□ -0.16
RTL6Q6ICC9 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RTL6Q6ICC9 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
RTL6Q6ICC9 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RTL6Q6ICC9 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
RTL6Q6ICC9 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RTL6Q6ICC9 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RTL6Q6ICC9 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
RTL6Q6ICC9 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
RTL6Q6ICC9 LINC02447-202ENST00000501888 2146 ntBASIC14.02□□□□□ -0.16
RTL6Q6ICC9 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.02□□□□□ -0.16
RTL6Q6ICC9 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RTL6Q6ICC9 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RTL6Q6ICC9 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RTL6Q6ICC9 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.16
RTL6Q6ICC9 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
RTL6Q6ICC9 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.02□□□□□ -0.16
RTL6Q6ICC9 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.02□□□□□ -0.16
RTL6Q6ICC9 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
RTL6Q6ICC9 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RTL6Q6ICC9 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RTL6Q6ICC9 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RTL6Q6ICC9 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTL6Q6ICC9 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTL6Q6ICC9 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.02□□□□□ -0.17
RTL6Q6ICC9 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.02□□□□□ -0.17
RTL6Q6ICC9 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.02□□□□□ -0.17
RTL6Q6ICC9 KRT223P-202ENST00000449164 1292 ntBASIC14.02□□□□□ -0.17
RTL6Q6ICC9 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.02□□□□□ -0.17
RTL6Q6ICC9 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.02□□□□□ -0.17
RTL6Q6ICC9 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.02□□□□□ -0.17
RTL6Q6ICC9 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.02□□□□□ -0.17
RTL6Q6ICC9 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.02□□□□□ -0.17
RTL6Q6ICC9 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
RTL6Q6ICC9 TDH-203ENST00000531764 1110 ntBASIC14.02□□□□□ -0.17
RTL6Q6ICC9 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
RTL6Q6ICC9 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.02□□□□□ -0.17
RTL6Q6ICC9 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.02□□□□□ -0.17
RTL6Q6ICC9 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.02□□□□□ -0.17
RTL6Q6ICC9 AL049840.4-201ENST00000602422 811 ntBASIC14.02□□□□□ -0.17
RTL6Q6ICC9 AC133552.6-201ENST00000613406 534 ntBASIC14.02□□□□□ -0.17
RTL6Q6ICC9 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms