Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 AC009407.1-201ENST00000568958 598 ntBASIC18.54■□□□□ 0.56
RNF20Q5VTR2 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 AC025181.2-201ENST00000606994 802 ntBASIC18.54■□□□□ 0.56
RNF20Q5VTR2 AC106028.4-201ENST00000614509 607 ntBASIC18.54■□□□□ 0.56
RNF20Q5VTR2 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 AGAP7P-201ENST00000582299 2062 ntBASIC18.54■□□□□ 0.56
RNF20Q5VTR2 AGAP14-201ENST00000624701 2060 ntBASIC18.54■□□□□ 0.56
RNF20Q5VTR2 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 WASH3P-207ENST00000560956 1394 ntBASIC18.54■□□□□ 0.56
RNF20Q5VTR2 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF20Q5VTR2 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 AL512638.1-201ENST00000457493 794 ntBASIC18.53■□□□□ 0.56
RNF20Q5VTR2 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 AC004890.2-204ENST00000481968 304 ntBASIC18.53■□□□□ 0.56
RNF20Q5VTR2 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 AC022144.1-201ENST00000602255 1580 ntBASIC18.53■□□□□ 0.56
RNF20Q5VTR2 AC000095.1-201ENST00000603208 874 ntBASIC18.53■□□□□ 0.56
RNF20Q5VTR2 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 TNRC18P2-201ENST00000417666 2714 ntBASIC18.53■□□□□ 0.56
RNF20Q5VTR2 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF20Q5VTR2 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF20Q5VTR2 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF20Q5VTR2 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF20Q5VTR2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF20Q5VTR2 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF20Q5VTR2 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF20Q5VTR2 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF20Q5VTR2 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF20Q5VTR2 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF20Q5VTR2 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF20Q5VTR2 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF20Q5VTR2 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF20Q5VTR2 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF20Q5VTR2 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF20Q5VTR2 BASP1P1-201ENST00000430708 665 ntBASIC18.52■□□□□ 0.56
RNF20Q5VTR2 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF20Q5VTR2 MEIS3P1-201ENST00000495167 958 ntBASIC18.52■□□□□ 0.56
RNF20Q5VTR2 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF20Q5VTR2 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.52■□□□□ 0.56
RNF20Q5VTR2 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.52■□□□□ 0.56
RNF20Q5VTR2 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms