Protein–RNA interactions for Protein: Q3B726

TWISTNB, DNA-directed RNA polymerase I subunit RPA43, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWISTNBQ3B726 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TWISTNBQ3B726 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC19.79■□□□□ 0.76
TWISTNBQ3B726 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC19.79■□□□□ 0.76
TWISTNBQ3B726 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TWISTNBQ3B726 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TWISTNBQ3B726 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TWISTNBQ3B726 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TWISTNBQ3B726 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC19.79■□□□□ 0.76
TWISTNBQ3B726 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TWISTNBQ3B726 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC19.79■□□□□ 0.76
TWISTNBQ3B726 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TWISTNBQ3B726 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TWISTNBQ3B726 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC19.79■□□□□ 0.76
TWISTNBQ3B726 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
TWISTNBQ3B726 AC126177.1-201ENST00000547829 2218 ntBASIC19.79■□□□□ 0.76
TWISTNBQ3B726 SLC9A7P1-202ENST00000556476 2239 ntBASIC19.79■□□□□ 0.76
TWISTNBQ3B726 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TWISTNBQ3B726 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC19.79■□□□□ 0.76
TWISTNBQ3B726 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TWISTNBQ3B726 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TWISTNBQ3B726 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TWISTNBQ3B726 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 RNU1-114P-201ENST00000365297 166 ntBASIC19.78■□□□□ 0.76
TWISTNBQ3B726 MGST3-203ENST00000367885 680 ntTSL 2 BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 AC022137.2-201ENST00000503482 481 ntBASIC19.78■□□□□ 0.76
TWISTNBQ3B726 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 AC009486.1-201ENST00000569860 813 ntBASIC19.78■□□□□ 0.76
TWISTNBQ3B726 AC015936.2-201ENST00000593177 259 ntBASIC19.78■□□□□ 0.76
TWISTNBQ3B726 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 PRSS30P-206ENST00000641773 873 ntBASIC19.78■□□□□ 0.76
TWISTNBQ3B726 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
TWISTNBQ3B726 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 MXI1-205ENST00000393134 889 ntTSL 2 BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 U91328.1-201ENST00000437528 223 ntBASIC19.77■□□□□ 0.76
TWISTNBQ3B726 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 AC068587.3-201ENST00000526613 355 ntBASIC19.77■□□□□ 0.76
TWISTNBQ3B726 PTP4A1P2-201ENST00000546033 454 ntBASIC19.77■□□□□ 0.76
TWISTNBQ3B726 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 AP005019.2-201ENST00000615104 511 ntBASIC19.77■□□□□ 0.76
TWISTNBQ3B726 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms