Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.88□□□□□ -0.03
VSX2P58304 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
VSX2P58304 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VSX2P58304 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VSX2P58304 AC009090.5-201ENST00000624886 2285 ntBASIC14.87□□□□□ -0.03
VSX2P58304 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
VSX2P58304 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VSX2P58304 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VSX2P58304 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
VSX2P58304 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.87□□□□□ -0.03
VSX2P58304 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VSX2P58304 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VSX2P58304 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VSX2P58304 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VSX2P58304 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VSX2P58304 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.87□□□□□ -0.03
VSX2P58304 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.87□□□□□ -0.03
VSX2P58304 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
VSX2P58304 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VSX2P58304 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
VSX2P58304 AC134915.1-201ENST00000426461 574 ntBASIC14.87□□□□□ -0.03
VSX2P58304 AL442647.2-201ENST00000429864 857 ntBASIC14.87□□□□□ -0.03
VSX2P58304 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.87□□□□□ -0.03
VSX2P58304 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.87□□□□□ -0.03
VSX2P58304 KRT17P7-201ENST00000451704 1104 ntBASIC14.87□□□□□ -0.03
VSX2P58304 INE1-201ENST00000456273 945 ntBASIC14.87□□□□□ -0.03
VSX2P58304 RPL13AP25-201ENST00000484130 612 ntBASIC14.87□□□□□ -0.03
VSX2P58304 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VSX2P58304 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.87□□□□□ -0.03
VSX2P58304 AC133539.2-201ENST00000604757 467 ntBASIC14.87□□□□□ -0.03
VSX2P58304 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VSX2P58304 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VSX2P58304 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
VSX2P58304 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VSX2P58304 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.87□□□□□ -0.03
VSX2P58304 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VSX2P58304 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
VSX2P58304 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
VSX2P58304 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.87□□□□□ -0.03
VSX2P58304 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.87□□□□□ -0.03
VSX2P58304 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VSX2P58304 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VSX2P58304 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
VSX2P58304 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VSX2P58304 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
VSX2P58304 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VSX2P58304 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
VSX2P58304 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VSX2P58304 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.86□□□□□ -0.03
VSX2P58304 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
VSX2P58304 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VSX2P58304 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VSX2P58304 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VSX2P58304 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
VSX2P58304 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VSX2P58304 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.86□□□□□ -0.03
VSX2P58304 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.86□□□□□ -0.03
VSX2P58304 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VSX2P58304 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VSX2P58304 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
VSX2P58304 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VSX2P58304 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.86□□□□□ -0.03
VSX2P58304 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VSX2P58304 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.86□□□□□ -0.03
VSX2P58304 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.86□□□□□ -0.03
VSX2P58304 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.86□□□□□ -0.03
VSX2P58304 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.86□□□□□ -0.03
VSX2P58304 GAPDHP21-201ENST00000450301 1010 ntBASIC14.86□□□□□ -0.03
VSX2P58304 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.86□□□□□ -0.03
VSX2P58304 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.86□□□□□ -0.03
VSX2P58304 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.86□□□□□ -0.03
VSX2P58304 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.86□□□□□ -0.03
VSX2P58304 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.86□□□□□ -0.03
VSX2P58304 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
VSX2P58304 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
VSX2P58304 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
VSX2P58304 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
VSX2P58304 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VSX2P58304 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.86□□□□□ -0.03
VSX2P58304 AL359711.2-201ENST00000563105 872 ntBASIC14.86□□□□□ -0.03
VSX2P58304 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VSX2P58304 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
VSX2P58304 AL033527.5-201ENST00000641382 801 ntBASIC14.86□□□□□ -0.03
VSX2P58304 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VSX2P58304 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VSX2P58304 INTS4P2-202ENST00000614726 2019 ntBASIC14.86□□□□□ -0.03
VSX2P58304 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
VSX2P58304 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VSX2P58304 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
VSX2P58304 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
VSX2P58304 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
VSX2P58304 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.86□□□□□ -0.03
VSX2P58304 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VSX2P58304 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VSX2P58304 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
VSX2P58304 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VSX2P58304 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.85□□□□□ -0.03
VSX2P58304 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VSX2P58304 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
VSX2P58304 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms