Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.71■□□□□ 0.43
HMGCS2P54868 CHMP4BP1-201ENST00000556017 588 ntBASIC17.71■□□□□ 0.43
HMGCS2P54868 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.71■□□□□ 0.43
HMGCS2P54868 MIR3619-201ENST00000579667 83 ntBASIC17.71■□□□□ 0.43
HMGCS2P54868 RN7SL190P-201ENST00000582519 257 ntBASIC17.71■□□□□ 0.43
HMGCS2P54868 AC016629.1-201ENST00000596579 586 ntBASIC17.71■□□□□ 0.43
HMGCS2P54868 AC004466.1-201ENST00000599515 1080 ntBASIC17.71■□□□□ 0.43
HMGCS2P54868 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.71■□□□□ 0.43
HMGCS2P54868 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.71■□□□□ 0.43
HMGCS2P54868 AL645728.2-202ENST00000641679 227 ntBASIC17.71■□□□□ 0.43
HMGCS2P54868 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCS2P54868 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.71■□□□□ 0.43
HMGCS2P54868 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCS2P54868 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCS2P54868 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.71■□□□□ 0.43
HMGCS2P54868 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
HMGCS2P54868 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCS2P54868 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
HMGCS2P54868 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
HMGCS2P54868 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
HMGCS2P54868 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCS2P54868 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.7■□□□□ 0.42
HMGCS2P54868 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS2P54868 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HMGCS2P54868 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HMGCS2P54868 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS2P54868 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS2P54868 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HMGCS2P54868 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS2P54868 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
HMGCS2P54868 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS2P54868 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS2P54868 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS2P54868 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.7■□□□□ 0.42
HMGCS2P54868 CHMP1AP1-201ENST00000445563 662 ntBASIC17.7■□□□□ 0.42
HMGCS2P54868 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.7■□□□□ 0.42
HMGCS2P54868 AC100850.1-201ENST00000506768 649 ntBASIC17.7■□□□□ 0.42
HMGCS2P54868 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS2P54868 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.7■□□□□ 0.42
HMGCS2P54868 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
HMGCS2P54868 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.7■□□□□ 0.42
HMGCS2P54868 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS2P54868 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS2P54868 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.7■□□□□ 0.42
HMGCS2P54868 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS2P54868 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HMGCS2P54868 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS2P54868 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.7■□□□□ 0.42
HMGCS2P54868 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS2P54868 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HMGCS2P54868 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS2P54868 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCS2P54868 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS2P54868 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS2P54868 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
HMGCS2P54868 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS2P54868 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.69■□□□□ 0.42
HMGCS2P54868 AC009090.5-201ENST00000624886 2285 ntBASIC17.69■□□□□ 0.42
HMGCS2P54868 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS2P54868 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS2P54868 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS2P54868 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS2P54868 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS2P54868 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS2P54868 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HMGCS2P54868 REXO1L5P-201ENST00000622260 2098 ntBASIC17.69■□□□□ 0.42
HMGCS2P54868 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS2P54868 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS2P54868 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS2P54868 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
HMGCS2P54868 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS2P54868 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS2P54868 HLA-K-203ENST00000430151 1046 ntBASIC17.69■□□□□ 0.42
HMGCS2P54868 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.69■□□□□ 0.42
HMGCS2P54868 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.69■□□□□ 0.42
HMGCS2P54868 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HMGCS2P54868 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.69■□□□□ 0.42
HMGCS2P54868 AC015967.2-201ENST00000624092 234 ntBASIC17.69■□□□□ 0.42
HMGCS2P54868 AC006435.4-201ENST00000625037 234 ntBASIC17.69■□□□□ 0.42
HMGCS2P54868 AL356737.1-201ENST00000634391 234 ntBASIC17.69■□□□□ 0.42
HMGCS2P54868 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
HMGCS2P54868 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
HMGCS2P54868 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.69■□□□□ 0.42
HMGCS2P54868 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS2P54868 TNRC18P3-201ENST00000441896 2691 ntBASIC17.69■□□□□ 0.42
HMGCS2P54868 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
HMGCS2P54868 CLUHP2-201ENST00000426660 1303 ntBASIC17.69■□□□□ 0.42
HMGCS2P54868 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS2P54868 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.69■□□□□ 0.42
HMGCS2P54868 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS2P54868 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS2P54868 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.69■□□□□ 0.42
HMGCS2P54868 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS2P54868 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCS2P54868 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCS2P54868 CICP13-201ENST00000422015 2789 ntBASIC17.68■□□□□ 0.42
HMGCS2P54868 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.68■□□□□ 0.42
HMGCS2P54868 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HMGCS2P54868 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCS2P54868 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms