Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
EPHB4P54760 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.45■□□□□ 0.38
EPHB4P54760 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
EPHB4P54760 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
EPHB4P54760 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EPHB4P54760 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.45■□□□□ 0.38
EPHB4P54760 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EPHB4P54760 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
EPHB4P54760 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.45■□□□□ 0.38
EPHB4P54760 AC074338.1-201ENST00000416825 156 ntBASIC17.45■□□□□ 0.38
EPHB4P54760 CALR4P-201ENST00000431943 946 ntBASIC17.45■□□□□ 0.38
EPHB4P54760 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.45■□□□□ 0.38
EPHB4P54760 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
EPHB4P54760 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.45■□□□□ 0.38
EPHB4P54760 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.45■□□□□ 0.38
EPHB4P54760 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
EPHB4P54760 ENPP7P5-201ENST00000541031 1031 ntBASIC17.45■□□□□ 0.38
EPHB4P54760 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.45■□□□□ 0.38
EPHB4P54760 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
EPHB4P54760 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
EPHB4P54760 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.45■□□□□ 0.38
EPHB4P54760 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.45■□□□□ 0.38
EPHB4P54760 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.45■□□□□ 0.38
EPHB4P54760 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.45■□□□□ 0.38
EPHB4P54760 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EPHB4P54760 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
EPHB4P54760 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.45■□□□□ 0.38
EPHB4P54760 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
EPHB4P54760 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
EPHB4P54760 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
EPHB4P54760 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
EPHB4P54760 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
EPHB4P54760 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.45■□□□□ 0.38
EPHB4P54760 LINC02228-204ENST00000642115 2962 ntBASIC17.45■□□□□ 0.38
EPHB4P54760 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.45■□□□□ 0.38
EPHB4P54760 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.45■□□□□ 0.38
EPHB4P54760 GGT3P-204ENST00000453783 1664 ntBASIC17.45■□□□□ 0.38
EPHB4P54760 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
EPHB4P54760 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
EPHB4P54760 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.45■□□□□ 0.38
EPHB4P54760 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EPHB4P54760 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
EPHB4P54760 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
EPHB4P54760 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EPHB4P54760 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
EPHB4P54760 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EPHB4P54760 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
EPHB4P54760 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.44■□□□□ 0.38
EPHB4P54760 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.44■□□□□ 0.38
EPHB4P54760 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.44■□□□□ 0.38
EPHB4P54760 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.44■□□□□ 0.38
EPHB4P54760 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.44■□□□□ 0.38
EPHB4P54760 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EPHB4P54760 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EPHB4P54760 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
EPHB4P54760 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EPHB4P54760 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.44■□□□□ 0.38
EPHB4P54760 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
EPHB4P54760 BAATP1-201ENST00000412284 1225 ntBASIC17.44■□□□□ 0.38
EPHB4P54760 AC016694.1-201ENST00000434179 700 ntBASIC17.44■□□□□ 0.38
EPHB4P54760 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
EPHB4P54760 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.44■□□□□ 0.38
EPHB4P54760 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
EPHB4P54760 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.44■□□□□ 0.38
EPHB4P54760 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EPHB4P54760 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.44■□□□□ 0.38
EPHB4P54760 DUX4L45-201ENST00000566406 1057 ntBASIC17.44■□□□□ 0.38
EPHB4P54760 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.44■□□□□ 0.38
EPHB4P54760 AC016629.1-201ENST00000596579 586 ntBASIC17.44■□□□□ 0.38
EPHB4P54760 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.44■□□□□ 0.38
EPHB4P54760 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.44■□□□□ 0.38
EPHB4P54760 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
EPHB4P54760 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EPHB4P54760 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.44■□□□□ 0.38
EPHB4P54760 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EPHB4P54760 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
EPHB4P54760 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EPHB4P54760 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.44■□□□□ 0.38
EPHB4P54760 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.44■□□□□ 0.38
EPHB4P54760 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EPHB4P54760 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.44■□□□□ 0.38
EPHB4P54760 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EPHB4P54760 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.44■□□□□ 0.38
EPHB4P54760 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EPHB4P54760 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EPHB4P54760 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.44■□□□□ 0.38
EPHB4P54760 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EPHB4P54760 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
EPHB4P54760 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHB4P54760 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.43■□□□□ 0.38
EPHB4P54760 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHB4P54760 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHB4P54760 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EPHB4P54760 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EPHB4P54760 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
EPHB4P54760 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EPHB4P54760 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHB4P54760 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EPHB4P54760 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EPHB4P54760 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms