Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 AC099568.2-201ENST00000609194 695 ntBASIC16.6■□□□□ 0.25
RAD23BP54727 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.6■□□□□ 0.25
RAD23BP54727 MIR8072-201ENST00000614241 80 ntBASIC16.6■□□□□ 0.25
RAD23BP54727 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAD23BP54727 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RAD23BP54727 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAD23BP54727 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RAD23BP54727 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.6■□□□□ 0.25
RAD23BP54727 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAD23BP54727 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.6■□□□□ 0.25
RAD23BP54727 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.6■□□□□ 0.25
RAD23BP54727 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAD23BP54727 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAD23BP54727 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAD23BP54727 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAD23BP54727 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
RAD23BP54727 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAD23BP54727 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAD23BP54727 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.6■□□□□ 0.25
RAD23BP54727 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAD23BP54727 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAD23BP54727 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RAD23BP54727 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.59■□□□□ 0.25
RAD23BP54727 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RAD23BP54727 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAD23BP54727 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.59■□□□□ 0.25
RAD23BP54727 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAD23BP54727 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAD23BP54727 C18orf15-201ENST00000623680 2534 ntBASIC16.59■□□□□ 0.25
RAD23BP54727 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.59■□□□□ 0.25
RAD23BP54727 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RAD23BP54727 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAD23BP54727 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAD23BP54727 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.59■□□□□ 0.25
RAD23BP54727 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAD23BP54727 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.59■□□□□ 0.25
RAD23BP54727 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAD23BP54727 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAD23BP54727 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAD23BP54727 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAD23BP54727 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.59■□□□□ 0.25
RAD23BP54727 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAD23BP54727 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAD23BP54727 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.59■□□□□ 0.25
RAD23BP54727 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAD23BP54727 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.59■□□□□ 0.25
RAD23BP54727 TERF1P3-201ENST00000505638 1227 ntBASIC16.59■□□□□ 0.25
RAD23BP54727 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.59■□□□□ 0.25
RAD23BP54727 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.59■□□□□ 0.25
RAD23BP54727 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.59■□□□□ 0.25
RAD23BP54727 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.59■□□□□ 0.25
RAD23BP54727 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.59■□□□□ 0.25
RAD23BP54727 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.59■□□□□ 0.25
RAD23BP54727 RRP7BP-205ENST00000566851 833 ntBASIC16.59■□□□□ 0.25
RAD23BP54727 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAD23BP54727 CHCHD2P3-201ENST00000603038 451 ntBASIC16.59■□□□□ 0.25
RAD23BP54727 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.59■□□□□ 0.25
RAD23BP54727 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RAD23BP54727 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RAD23BP54727 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAD23BP54727 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
RAD23BP54727 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RAD23BP54727 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAD23BP54727 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.59■□□□□ 0.25
RAD23BP54727 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RAD23BP54727 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RAD23BP54727 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAD23BP54727 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAD23BP54727 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAD23BP54727 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAD23BP54727 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.59■□□□□ 0.25
RAD23BP54727 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RAD23BP54727 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAD23BP54727 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAD23BP54727 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
RAD23BP54727 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAD23BP54727 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAD23BP54727 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.58■□□□□ 0.24
RAD23BP54727 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RAD23BP54727 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAD23BP54727 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
RAD23BP54727 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RAD23BP54727 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.58■□□□□ 0.24
RAD23BP54727 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAD23BP54727 PIN1P1-201ENST00000412108 996 ntBASIC16.58■□□□□ 0.24
RAD23BP54727 FAM86LP-201ENST00000478302 853 ntBASIC16.58■□□□□ 0.24
RAD23BP54727 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.58■□□□□ 0.24
RAD23BP54727 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
RAD23BP54727 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAD23BP54727 AC036164.1-201ENST00000570544 333 ntBASIC16.58■□□□□ 0.24
RAD23BP54727 AC025181.2-201ENST00000606994 802 ntBASIC16.58■□□□□ 0.24
RAD23BP54727 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.58■□□□□ 0.24
RAD23BP54727 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.58■□□□□ 0.24
RAD23BP54727 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAD23BP54727 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
RAD23BP54727 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RAD23BP54727 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RAD23BP54727 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAD23BP54727 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RAD23BP54727 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms