Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 ZNF890P-202ENST00000530367 1156 ntBASIC15.66■□□□□ 0.1
LIMK2P53671 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LIMK2P53671 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.66■□□□□ 0.1
LIMK2P53671 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LIMK2P53671 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.66■□□□□ 0.1
LIMK2P53671 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LIMK2P53671 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LIMK2P53671 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LIMK2P53671 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.66■□□□□ 0.1
LIMK2P53671 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LIMK2P53671 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LIMK2P53671 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LIMK2P53671 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LIMK2P53671 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.66■□□□□ 0.1
LIMK2P53671 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.66■□□□□ 0.1
LIMK2P53671 MROH4P-201ENST00000431302 1578 ntBASIC15.66■□□□□ 0.1
LIMK2P53671 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LIMK2P53671 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LIMK2P53671 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.66■□□□□ 0.1
LIMK2P53671 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.66■□□□□ 0.1
LIMK2P53671 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LIMK2P53671 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK2P53671 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK2P53671 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
LIMK2P53671 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK2P53671 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LIMK2P53671 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK2P53671 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK2P53671 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK2P53671 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK2P53671 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.65■□□□□ 0.1
LIMK2P53671 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LIMK2P53671 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.65■□□□□ 0.1
LIMK2P53671 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.65■□□□□ 0.1
LIMK2P53671 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK2P53671 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK2P53671 ZBED1P1-201ENST00000502364 1930 ntBASIC15.65■□□□□ 0.1
LIMK2P53671 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK2P53671 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK2P53671 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK2P53671 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK2P53671 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.65■□□□□ 0.1
LIMK2P53671 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
LIMK2P53671 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
LIMK2P53671 FO393414.2-201ENST00000405153 598 ntBASIC15.65■□□□□ 0.1
LIMK2P53671 SPDYE17-201ENST00000412399 783 ntBASIC15.65■□□□□ 0.1
LIMK2P53671 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.65■□□□□ 0.1
LIMK2P53671 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.65■□□□□ 0.1
LIMK2P53671 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.65■□□□□ 0.1
LIMK2P53671 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.65■□□□□ 0.1
LIMK2P53671 CR383656.12-201ENST00000549567 513 ntBASIC15.65■□□□□ 0.1
LIMK2P53671 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.65■□□□□ 0.1
LIMK2P53671 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.65■□□□□ 0.1
LIMK2P53671 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK2P53671 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.65■□□□□ 0.1
LIMK2P53671 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
LIMK2P53671 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK2P53671 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
LIMK2P53671 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK2P53671 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK2P53671 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK2P53671 AC084364.1-201ENST00000551967 1556 ntBASIC15.65■□□□□ 0.1
LIMK2P53671 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK2P53671 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
LIMK2P53671 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK2P53671 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LIMK2P53671 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LIMK2P53671 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIMK2P53671 BTBD7P1-201ENST00000447253 1453 ntBASIC15.65■□□□□ 0.1
LIMK2P53671 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.1
LIMK2P53671 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK2P53671 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LIMK2P53671 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK2P53671 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK2P53671 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LIMK2P53671 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.64■□□□□ 0.09
LIMK2P53671 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK2P53671 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK2P53671 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK2P53671 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK2P53671 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK2P53671 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK2P53671 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK2P53671 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK2P53671 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LIMK2P53671 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK2P53671 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK2P53671 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK2P53671 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LIMK2P53671 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.64■□□□□ 0.09
LIMK2P53671 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LIMK2P53671 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.64■□□□□ 0.09
LIMK2P53671 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK2P53671 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.64■□□□□ 0.09
LIMK2P53671 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.64■□□□□ 0.09
LIMK2P53671 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.64■□□□□ 0.09
LIMK2P53671 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
LIMK2P53671 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK2P53671 AL136379.1-201ENST00000623471 2642 ntBASIC15.64■□□□□ 0.09
LIMK2P53671 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms