Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 GCOM2-201ENST00000509133 1104 ntBASIC26.91■■□□□ 1.9
SMARCA4P51532 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
SMARCA4P51532 MIR3188-201ENST00000583494 85 ntBASIC26.91■■□□□ 1.9
SMARCA4P51532 AC005041.3-201ENST00000606287 649 ntBASIC26.91■■□□□ 1.9
SMARCA4P51532 AC144522.1-201ENST00000625111 1658 ntBASIC26.91■■□□□ 1.9
SMARCA4P51532 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SMARCA4P51532 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SMARCA4P51532 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SMARCA4P51532 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
SMARCA4P51532 HPGD-203ENST00000422112 805 ntTSL 2 BASIC26.9■■□□□ 1.9
SMARCA4P51532 AC012362.1-201ENST00000434906 739 ntBASIC26.9■■□□□ 1.9
SMARCA4P51532 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC26.9■■□□□ 1.9
SMARCA4P51532 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
SMARCA4P51532 DUTP3-201ENST00000450025 415 ntBASIC26.9■■□□□ 1.9
SMARCA4P51532 FTH1P22-201ENST00000456305 520 ntBASIC26.9■■□□□ 1.9
SMARCA4P51532 RN7SL81P-201ENST00000493781 261 ntBASIC26.9■■□□□ 1.9
SMARCA4P51532 AC008723.1-201ENST00000506922 207 ntBASIC26.9■■□□□ 1.9
SMARCA4P51532 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC26.9■■□□□ 1.9
SMARCA4P51532 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC26.9■■□□□ 1.9
SMARCA4P51532 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
SMARCA4P51532 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SMARCA4P51532 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SMARCA4P51532 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SMARCA4P51532 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SMARCA4P51532 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SMARCA4P51532 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC26.9■■□□□ 1.9
SMARCA4P51532 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC26.9■■□□□ 1.9
SMARCA4P51532 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC26.9■■□□□ 1.9
SMARCA4P51532 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC26.9■■□□□ 1.9
SMARCA4P51532 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
SMARCA4P51532 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SMARCA4P51532 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SMARCA4P51532 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
SMARCA4P51532 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC26.89■■□□□ 1.9
SMARCA4P51532 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SMARCA4P51532 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SMARCA4P51532 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC26.89■■□□□ 1.9
SMARCA4P51532 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC26.89■■□□□ 1.9
SMARCA4P51532 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SMARCA4P51532 ABR-203ENST00000536794 2213 ntTSL 2 BASIC26.89■■□□□ 1.9
SMARCA4P51532 AC092127.1-201ENST00000567093 3455 ntBASIC26.89■■□□□ 1.9
SMARCA4P51532 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SMARCA4P51532 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
SMARCA4P51532 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC26.89■■□□□ 1.9
SMARCA4P51532 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
SMARCA4P51532 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
SMARCA4P51532 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SMARCA4P51532 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SMARCA4P51532 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
SMARCA4P51532 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
SMARCA4P51532 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC26.89■■□□□ 1.9
SMARCA4P51532 AL161773.1-201ENST00000624845 863 ntBASIC26.89■■□□□ 1.9
SMARCA4P51532 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
SMARCA4P51532 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.89
SMARCA4P51532 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC26.88■■□□□ 1.89
SMARCA4P51532 API5-202ENST00000420461 2009 ntTSL 2 BASIC26.88■■□□□ 1.89
SMARCA4P51532 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SMARCA4P51532 STK26-204ENST00000481105 1835 ntTSL 2 BASIC26.88■■□□□ 1.89
SMARCA4P51532 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SMARCA4P51532 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC26.88■■□□□ 1.89
SMARCA4P51532 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SMARCA4P51532 MIR1227-201ENST00000408484 88 ntBASIC26.88■■□□□ 1.89
SMARCA4P51532 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SMARCA4P51532 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC26.88■■□□□ 1.89
SMARCA4P51532 AL627422.1-201ENST00000434104 580 ntBASIC26.88■■□□□ 1.89
SMARCA4P51532 AL139008.1-201ENST00000437894 228 ntBASIC26.88■■□□□ 1.89
SMARCA4P51532 AC018463.1-201ENST00000456674 917 ntBASIC26.88■■□□□ 1.89
SMARCA4P51532 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC26.88■■□□□ 1.89
SMARCA4P51532 POLD4-208ENST00000532830 904 ntTSL 3 BASIC26.88■■□□□ 1.89
SMARCA4P51532 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC26.88■■□□□ 1.89
SMARCA4P51532 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SMARCA4P51532 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
SMARCA4P51532 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
SMARCA4P51532 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
SMARCA4P51532 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC26.88■■□□□ 1.89
SMARCA4P51532 AC090502.4-201ENST00000551714 1386 ntBASIC26.88■■□□□ 1.89
SMARCA4P51532 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SMARCA4P51532 MBP-201ENST00000354542 575 ntTSL 2 BASIC26.87■■□□□ 1.89
SMARCA4P51532 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SMARCA4P51532 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SMARCA4P51532 AC026320.2-201ENST00000434379 478 ntBASIC26.87■■□□□ 1.89
SMARCA4P51532 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
SMARCA4P51532 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SMARCA4P51532 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC26.87■■□□□ 1.89
SMARCA4P51532 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC26.87■■□□□ 1.89
SMARCA4P51532 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC26.87■■□□□ 1.89
SMARCA4P51532 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC26.87■■□□□ 1.89
SMARCA4P51532 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
SMARCA4P51532 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SMARCA4P51532 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC26.87■■□□□ 1.89
SMARCA4P51532 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
SMARCA4P51532 AC131206.1-201ENST00000538078 1211 ntBASIC26.87■■□□□ 1.89
SMARCA4P51532 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC26.87■■□□□ 1.89
SMARCA4P51532 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC26.86■■□□□ 1.89
SMARCA4P51532 RAN-210ENST00000541630 1475 ntTSL 2 BASIC26.86■■□□□ 1.89
SMARCA4P51532 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC26.86■■□□□ 1.89
SMARCA4P51532 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC26.86■■□□□ 1.89
SMARCA4P51532 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC26.86■■□□□ 1.89
SMARCA4P51532 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
SMARCA4P51532 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms