Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A12P48065 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A12P48065 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A12P48065 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A12P48065 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC6A12P48065 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A12P48065 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A12P48065 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A12P48065 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A12P48065 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A12P48065 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A12P48065 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A12P48065 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A12P48065 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SLC6A12P48065 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
SLC6A12P48065 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A12P48065 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC6A12P48065 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A12P48065 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.92□□□□□ -0.02
SLC6A12P48065 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A12P48065 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A12P48065 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A12P48065 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A12P48065 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC6A12P48065 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC6A12P48065 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
SLC6A12P48065 MEP1AP4-201ENST00000423244 1087 ntBASIC14.92□□□□□ -0.02
SLC6A12P48065 GNAQP1-201ENST00000444815 1067 ntBASIC14.92□□□□□ -0.02
SLC6A12P48065 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC6A12P48065 INGX-202ENST00000489074 768 ntBASIC14.92□□□□□ -0.02
SLC6A12P48065 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC6A12P48065 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.92□□□□□ -0.02
SLC6A12P48065 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A12P48065 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SLC6A12P48065 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC6A12P48065 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC6A12P48065 AC027796.2-201ENST00000575326 344 ntBASIC14.92□□□□□ -0.02
SLC6A12P48065 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC6A12P48065 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC6A12P48065 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC6A12P48065 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
SLC6A12P48065 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A12P48065 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A12P48065 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A12P48065 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A12P48065 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A12P48065 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A12P48065 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A12P48065 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A12P48065 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A12P48065 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A12P48065 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A12P48065 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A12P48065 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A12P48065 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A12P48065 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SLC6A12P48065 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A12P48065 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC6A12P48065 CICP23-201ENST00000605013 2741 ntBASIC14.91□□□□□ -0.02
SLC6A12P48065 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SLC6A12P48065 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A12P48065 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A12P48065 AL359258.3-201ENST00000622910 2331 ntBASIC14.91□□□□□ -0.02
SLC6A12P48065 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SLC6A12P48065 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SLC6A12P48065 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A12P48065 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A12P48065 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A12P48065 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A12P48065 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC6A12P48065 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC6A12P48065 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC6A12P48065 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC6A12P48065 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC6A12P48065 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC6A12P48065 SPTLC1P1-201ENST00000447199 261 ntBASIC14.91□□□□□ -0.02
SLC6A12P48065 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC6A12P48065 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A12P48065 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC6A12P48065 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.91□□□□□ -0.02
SLC6A12P48065 AC093004.1-201ENST00000508850 424 ntBASIC14.91□□□□□ -0.02
SLC6A12P48065 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.91□□□□□ -0.02
SLC6A12P48065 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC6A12P48065 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
SLC6A12P48065 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.91□□□□□ -0.02
SLC6A12P48065 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.91□□□□□ -0.02
SLC6A12P48065 AL049840.4-201ENST00000602422 811 ntBASIC14.91□□□□□ -0.02
SLC6A12P48065 AC099568.2-201ENST00000609194 695 ntBASIC14.91□□□□□ -0.02
SLC6A12P48065 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A12P48065 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC6A12P48065 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A12P48065 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC6A12P48065 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A12P48065 FGD5P1-202ENST00000614866 2498 ntBASIC14.91□□□□□ -0.02
SLC6A12P48065 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC6A12P48065 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SLC6A12P48065 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC6A12P48065 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A12P48065 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
SLC6A12P48065 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms