Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
NEDD4P46934 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEDD4P46934 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
NEDD4P46934 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEDD4P46934 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEDD4P46934 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NEDD4P46934 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.17■□□□□ 0.5
NEDD4P46934 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
NEDD4P46934 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEDD4P46934 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.17■□□□□ 0.5
NEDD4P46934 AC005034.1-201ENST00000426657 489 ntBASIC18.17■□□□□ 0.5
NEDD4P46934 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.17■□□□□ 0.5
NEDD4P46934 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.17■□□□□ 0.5
NEDD4P46934 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
NEDD4P46934 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.17■□□□□ 0.5
NEDD4P46934 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.17■□□□□ 0.5
NEDD4P46934 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.17■□□□□ 0.5
NEDD4P46934 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.17■□□□□ 0.5
NEDD4P46934 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.17■□□□□ 0.5
NEDD4P46934 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
NEDD4P46934 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
NEDD4P46934 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEDD4P46934 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEDD4P46934 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.17■□□□□ 0.5
NEDD4P46934 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC18.17■□□□□ 0.5
NEDD4P46934 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NEDD4P46934 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEDD4P46934 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NEDD4P46934 AL158070.2-201ENST00000623713 1621 ntBASIC18.17■□□□□ 0.5
NEDD4P46934 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEDD4P46934 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEDD4P46934 AP000845.1-201ENST00000581677 2131 ntBASIC18.16■□□□□ 0.5
NEDD4P46934 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEDD4P46934 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEDD4P46934 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEDD4P46934 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.16■□□□□ 0.5
NEDD4P46934 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NEDD4P46934 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NEDD4P46934 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEDD4P46934 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.16■□□□□ 0.5
NEDD4P46934 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEDD4P46934 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEDD4P46934 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEDD4P46934 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEDD4P46934 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NEDD4P46934 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.16■□□□□ 0.5
NEDD4P46934 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NEDD4P46934 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEDD4P46934 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NEDD4P46934 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.16■□□□□ 0.5
NEDD4P46934 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEDD4P46934 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
NEDD4P46934 TTTY23B-201ENST00000442790 549 ntBASIC18.16■□□□□ 0.5
NEDD4P46934 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.16■□□□□ 0.5
NEDD4P46934 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NEDD4P46934 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.16■□□□□ 0.5
NEDD4P46934 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.16■□□□□ 0.5
NEDD4P46934 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NEDD4P46934 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NEDD4P46934 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC18.16■□□□□ 0.5
NEDD4P46934 AC008735.3-201ENST00000596646 500 ntBASIC18.16■□□□□ 0.5
NEDD4P46934 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.16■□□□□ 0.5
NEDD4P46934 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.16■□□□□ 0.5
NEDD4P46934 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.16■□□□□ 0.5
NEDD4P46934 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NEDD4P46934 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC18.16■□□□□ 0.5
NEDD4P46934 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.16■□□□□ 0.5
NEDD4P46934 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
NEDD4P46934 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.16■□□□□ 0.5
NEDD4P46934 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEDD4P46934 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NEDD4P46934 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NEDD4P46934 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEDD4P46934 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEDD4P46934 AL157414.3-201ENST00000624276 1954 ntBASIC18.15■□□□□ 0.5
NEDD4P46934 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NEDD4P46934 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NEDD4P46934 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEDD4P46934 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEDD4P46934 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NEDD4P46934 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEDD4P46934 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEDD4P46934 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEDD4P46934 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEDD4P46934 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
NEDD4P46934 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEDD4P46934 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NEDD4P46934 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.15■□□□□ 0.5
NEDD4P46934 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.15■□□□□ 0.5
NEDD4P46934 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.15■□□□□ 0.5
NEDD4P46934 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.15■□□□□ 0.5
NEDD4P46934 AC011495.1-201ENST00000498085 584 ntBASIC18.15■□□□□ 0.5
NEDD4P46934 AC004066.1-201ENST00000502488 802 ntBASIC18.15■□□□□ 0.5
NEDD4P46934 USP32P1-208ENST00000506594 1164 ntBASIC18.15■□□□□ 0.5
NEDD4P46934 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.15■□□□□ 0.5
NEDD4P46934 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.15■□□□□ 0.5
NEDD4P46934 ENPP7P5-201ENST00000541031 1031 ntBASIC18.15■□□□□ 0.5
NEDD4P46934 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NEDD4P46934 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
NEDD4P46934 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms