Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRCC3P46736 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
BRCC3P46736 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.4■□□□□ 0.22
BRCC3P46736 AC006001.1-201ENST00000325130 474 ntBASIC16.4■□□□□ 0.22
BRCC3P46736 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRCC3P46736 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
BRCC3P46736 AL139094.1-201ENST00000405549 1188 ntBASIC16.4■□□□□ 0.22
BRCC3P46736 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.4■□□□□ 0.22
BRCC3P46736 NUS1P3-201ENST00000423502 862 ntBASIC16.4■□□□□ 0.22
BRCC3P46736 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
BRCC3P46736 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.4■□□□□ 0.22
BRCC3P46736 YBX1P6-201ENST00000442962 1002 ntBASIC16.4■□□□□ 0.22
BRCC3P46736 AL355994.2-201ENST00000447882 704 ntBASIC16.4■□□□□ 0.22
BRCC3P46736 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
BRCC3P46736 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.4■□□□□ 0.22
BRCC3P46736 AC010328.2-201ENST00000597698 1111 ntBASIC16.4■□□□□ 0.22
BRCC3P46736 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
BRCC3P46736 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRCC3P46736 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.4■□□□□ 0.22
BRCC3P46736 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRCC3P46736 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRCC3P46736 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRCC3P46736 TUBB1P2-201ENST00000422712 1306 ntBASIC16.4■□□□□ 0.22
BRCC3P46736 TUBB1P1-201ENST00000503144 1300 ntBASIC16.4■□□□□ 0.22
BRCC3P46736 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.4■□□□□ 0.22
BRCC3P46736 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
BRCC3P46736 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRCC3P46736 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRCC3P46736 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
BRCC3P46736 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
BRCC3P46736 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
BRCC3P46736 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.39■□□□□ 0.21
BRCC3P46736 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
BRCC3P46736 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRCC3P46736 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.39■□□□□ 0.21
BRCC3P46736 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.39■□□□□ 0.21
BRCC3P46736 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
BRCC3P46736 AC090616.6-203ENST00000579186 1945 ntBASIC16.39■□□□□ 0.21
BRCC3P46736 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRCC3P46736 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.39■□□□□ 0.21
BRCC3P46736 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRCC3P46736 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRCC3P46736 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.39■□□□□ 0.21
BRCC3P46736 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRCC3P46736 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRCC3P46736 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRCC3P46736 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BRCC3P46736 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRCC3P46736 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
BRCC3P46736 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.39■□□□□ 0.21
BRCC3P46736 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.39■□□□□ 0.21
BRCC3P46736 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.39■□□□□ 0.21
BRCC3P46736 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.39■□□□□ 0.21
BRCC3P46736 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.39■□□□□ 0.21
BRCC3P46736 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.39■□□□□ 0.21
BRCC3P46736 ECM1P1-201ENST00000604092 1279 ntBASIC16.39■□□□□ 0.21
BRCC3P46736 AC132938.4-201ENST00000623835 848 ntBASIC16.39■□□□□ 0.21
BRCC3P46736 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.39■□□□□ 0.21
BRCC3P46736 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.39■□□□□ 0.21
BRCC3P46736 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
BRCC3P46736 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.39■□□□□ 0.21
BRCC3P46736 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BRCC3P46736 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRCC3P46736 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRCC3P46736 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRCC3P46736 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRCC3P46736 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRCC3P46736 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRCC3P46736 LRRC59-203ENST00000576448 1531 ntBASIC16.39■□□□□ 0.21
BRCC3P46736 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRCC3P46736 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BRCC3P46736 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.39■□□□□ 0.21
BRCC3P46736 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BRCC3P46736 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRCC3P46736 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRCC3P46736 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRCC3P46736 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
BRCC3P46736 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
BRCC3P46736 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BRCC3P46736 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
BRCC3P46736 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
BRCC3P46736 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
BRCC3P46736 CICP11-201ENST00000434745 2827 ntBASIC16.38■□□□□ 0.21
BRCC3P46736 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.38■□□□□ 0.21
BRCC3P46736 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
BRCC3P46736 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BRCC3P46736 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
BRCC3P46736 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
BRCC3P46736 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
BRCC3P46736 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
BRCC3P46736 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BRCC3P46736 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BRCC3P46736 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BRCC3P46736 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BRCC3P46736 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BRCC3P46736 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
BRCC3P46736 MIR1202-201ENST00000408529 83 ntBASIC16.38■□□□□ 0.21
BRCC3P46736 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.38■□□□□ 0.21
BRCC3P46736 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.38■□□□□ 0.21
BRCC3P46736 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms