Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
RFC4P35249 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RFC4P35249 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFC4P35249 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
RFC4P35249 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC19.23■□□□□ 0.67
RFC4P35249 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RFC4P35249 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
RFC4P35249 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC19.23■□□□□ 0.67
RFC4P35249 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC19.23■□□□□ 0.67
RFC4P35249 LY6E-208ENST00000520531 490 ntTSL 2 BASIC19.23■□□□□ 0.67
RFC4P35249 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFC4P35249 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC19.23■□□□□ 0.67
RFC4P35249 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC19.23■□□□□ 0.67
RFC4P35249 MIR4683-201ENST00000579659 81 ntBASIC19.23■□□□□ 0.67
RFC4P35249 MIR4750-201ENST00000584564 56 ntBASIC19.23■□□□□ 0.67
RFC4P35249 RN7SL555P-201ENST00000584742 339 ntBASIC19.23■□□□□ 0.67
RFC4P35249 AC005324.6-201ENST00000587972 613 ntBASIC19.23■□□□□ 0.67
RFC4P35249 AC020922.3-201ENST00000595064 547 ntBASIC19.23■□□□□ 0.67
RFC4P35249 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC19.23■□□□□ 0.67
RFC4P35249 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC19.23■□□□□ 0.67
RFC4P35249 AL162426.1-201ENST00000624141 743 ntBASIC19.23■□□□□ 0.67
RFC4P35249 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFC4P35249 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RFC4P35249 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFC4P35249 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFC4P35249 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFC4P35249 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RFC4P35249 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFC4P35249 AC080080.1-201ENST00000625121 2420 ntBASIC19.23■□□□□ 0.67
RFC4P35249 TKT-202ENST00000423516 2075 ntTSL 2 BASIC19.23■□□□□ 0.67
RFC4P35249 FKBP4P6-201ENST00000457486 1332 ntBASIC19.23■□□□□ 0.67
RFC4P35249 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RFC4P35249 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFC4P35249 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.23■□□□□ 0.67
RFC4P35249 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RFC4P35249 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RFC4P35249 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RFC4P35249 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFC4P35249 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFC4P35249 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFC4P35249 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RFC4P35249 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFC4P35249 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFC4P35249 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFC4P35249 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFC4P35249 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFC4P35249 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RFC4P35249 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC19.22■□□□□ 0.67
RFC4P35249 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC19.22■□□□□ 0.67
RFC4P35249 AC104784.1-201ENST00000473096 294 ntBASIC19.22■□□□□ 0.67
RFC4P35249 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC19.22■□□□□ 0.67
RFC4P35249 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RFC4P35249 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC19.22■□□□□ 0.67
RFC4P35249 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC19.22■□□□□ 0.67
RFC4P35249 AC090164.2-201ENST00000611487 516 ntBASIC19.22■□□□□ 0.67
RFC4P35249 AL136301.1-201ENST00000615830 422 ntBASIC19.22■□□□□ 0.67
RFC4P35249 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.22■□□□□ 0.67
RFC4P35249 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFC4P35249 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.22■□□□□ 0.67
RFC4P35249 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RFC4P35249 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFC4P35249 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFC4P35249 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RFC4P35249 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFC4P35249 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC4P35249 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFC4P35249 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC4P35249 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC19.21■□□□□ 0.67
RFC4P35249 AC092364.2-201ENST00000596710 2692 ntBASIC19.21■□□□□ 0.67
RFC4P35249 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
RFC4P35249 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC4P35249 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC4P35249 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC4P35249 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RFC4P35249 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFC4P35249 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.21■□□□□ 0.67
RFC4P35249 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC4P35249 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC4P35249 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC19.21■□□□□ 0.67
RFC4P35249 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFC4P35249 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC19.21■□□□□ 0.67
RFC4P35249 AL353637.1-201ENST00000451571 732 ntBASIC19.21■□□□□ 0.67
RFC4P35249 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC4P35249 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC19.21■□□□□ 0.67
RFC4P35249 AC100827.2-201ENST00000563214 1194 ntBASIC19.21■□□□□ 0.67
RFC4P35249 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFC4P35249 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC19.21■□□□□ 0.67
RFC4P35249 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFC4P35249 PCBP2-OT1-201ENST00000634357 590 ntBASIC19.21■□□□□ 0.67
RFC4P35249 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC4P35249 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC4P35249 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC4P35249 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC4P35249 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RFC4P35249 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC4P35249 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.21■□□□□ 0.66
RFC4P35249 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFC4P35249 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.2■□□□□ 0.66
RFC4P35249 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RFC4P35249 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 720.2 ms