Protein–RNA interactions for Protein: P26441

CNTF, Ciliary neurotrophic factor, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFP26441 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.5■□□□□ 0.07
CNTFP26441 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CNTFP26441 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
CNTFP26441 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNTFP26441 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNTFP26441 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CNTFP26441 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNTFP26441 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNTFP26441 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.5■□□□□ 0.07
CNTFP26441 AC104457.1-201ENST00000401024 814 ntBASIC15.5■□□□□ 0.07
CNTFP26441 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.5■□□□□ 0.07
CNTFP26441 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.5■□□□□ 0.07
CNTFP26441 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.5■□□□□ 0.07
CNTFP26441 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.5■□□□□ 0.07
CNTFP26441 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
CNTFP26441 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.5■□□□□ 0.07
CNTFP26441 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.5■□□□□ 0.07
CNTFP26441 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.5■□□□□ 0.07
CNTFP26441 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CNTFP26441 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.5■□□□□ 0.07
CNTFP26441 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CNTFP26441 AL133215.2-201ENST00000609242 977 ntBASIC15.5■□□□□ 0.07
CNTFP26441 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.5■□□□□ 0.07
CNTFP26441 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.5■□□□□ 0.07
CNTFP26441 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.5■□□□□ 0.07
CNTFP26441 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNTFP26441 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CNTFP26441 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.5■□□□□ 0.07
CNTFP26441 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNTFP26441 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNTFP26441 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNTFP26441 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNTFP26441 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.5■□□□□ 0.07
CNTFP26441 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNTFP26441 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CNTFP26441 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CNTFP26441 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CNTFP26441 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CNTFP26441 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.49■□□□□ 0.07
CNTFP26441 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
CNTFP26441 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.49■□□□□ 0.07
CNTFP26441 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNTFP26441 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CNTFP26441 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CNTFP26441 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CNTFP26441 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.49■□□□□ 0.07
CNTFP26441 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CNTFP26441 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNTFP26441 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNTFP26441 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CNTFP26441 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNTFP26441 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CNTFP26441 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNTFP26441 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CNTFP26441 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNTFP26441 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CNTFP26441 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CNTFP26441 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
CNTFP26441 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CNTFP26441 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNTFP26441 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CNTFP26441 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CNTFP26441 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CNTFP26441 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNTFP26441 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.49■□□□□ 0.07
CNTFP26441 HTR5BP-201ENST00000430851 1154 ntBASIC15.49■□□□□ 0.07
CNTFP26441 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.49■□□□□ 0.07
CNTFP26441 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.49■□□□□ 0.07
CNTFP26441 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.49■□□□□ 0.07
CNTFP26441 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.49■□□□□ 0.07
CNTFP26441 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.49■□□□□ 0.07
CNTFP26441 MTDHP5-201ENST00000598980 586 ntBASIC15.49■□□□□ 0.07
CNTFP26441 RN7SL828P-201ENST00000607615 303 ntBASIC15.49■□□□□ 0.07
CNTFP26441 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.49■□□□□ 0.07
CNTFP26441 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.49■□□□□ 0.07
CNTFP26441 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNTFP26441 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CNTFP26441 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNTFP26441 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CNTFP26441 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CNTFP26441 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CNTFP26441 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.49■□□□□ 0.07
CNTFP26441 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNTFP26441 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.49■□□□□ 0.07
CNTFP26441 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNTFP26441 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNTFP26441 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
CNTFP26441 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNTFP26441 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNTFP26441 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CNTFP26441 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNTFP26441 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNTFP26441 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CNTFP26441 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNTFP26441 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNTFP26441 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CNTFP26441 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNTFP26441 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.48■□□□□ 0.07
CNTFP26441 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNTFP26441 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms