Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC18.66■□□□□ 0.58
KCNA3P22001 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
KCNA3P22001 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC18.66■□□□□ 0.58
KCNA3P22001 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNA3P22001 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNA3P22001 AC084364.1-201ENST00000551967 1556 ntBASIC18.66■□□□□ 0.58
KCNA3P22001 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.66■□□□□ 0.58
KCNA3P22001 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KCNA3P22001 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNA3P22001 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNA3P22001 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNA3P22001 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KCNA3P22001 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNA3P22001 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
KCNA3P22001 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
KCNA3P22001 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.65■□□□□ 0.58
KCNA3P22001 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KCNA3P22001 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
KCNA3P22001 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.65■□□□□ 0.58
KCNA3P22001 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNA3P22001 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
KCNA3P22001 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNA3P22001 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNA3P22001 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC18.65■□□□□ 0.58
KCNA3P22001 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC18.65■□□□□ 0.58
KCNA3P22001 FAM58BP-201ENST00000439056 645 ntBASIC18.65■□□□□ 0.58
KCNA3P22001 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC18.65■□□□□ 0.58
KCNA3P22001 AL109837.1-201ENST00000603272 613 ntBASIC18.65■□□□□ 0.58
KCNA3P22001 AC007881.3-201ENST00000608897 607 ntBASIC18.65■□□□□ 0.58
KCNA3P22001 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNA3P22001 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KCNA3P22001 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KCNA3P22001 FAM90A2P-201ENST00000511144 1395 ntBASIC18.65■□□□□ 0.58
KCNA3P22001 FAM90A25P-201ENST00000528404 1395 ntBASIC18.65■□□□□ 0.58
KCNA3P22001 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNA3P22001 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNA3P22001 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
KCNA3P22001 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.65■□□□□ 0.58
KCNA3P22001 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
KCNA3P22001 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNA3P22001 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNA3P22001 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
KCNA3P22001 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
KCNA3P22001 AMT-239ENST00000636865 1914 ntTSL 5 BASIC18.64■□□□□ 0.58
KCNA3P22001 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
KCNA3P22001 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
KCNA3P22001 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
KCNA3P22001 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
KCNA3P22001 REXO1L5P-201ENST00000622260 2098 ntBASIC18.64■□□□□ 0.57
KCNA3P22001 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNA3P22001 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNA3P22001 AC244394.1-201ENST00000435000 1665 ntBASIC18.64■□□□□ 0.57
KCNA3P22001 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNA3P22001 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNA3P22001 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC18.64■□□□□ 0.57
KCNA3P22001 AL512430.1-201ENST00000392575 860 ntBASIC18.64■□□□□ 0.57
KCNA3P22001 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC18.64■□□□□ 0.57
KCNA3P22001 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC18.64■□□□□ 0.57
KCNA3P22001 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KCNA3P22001 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC18.64■□□□□ 0.57
KCNA3P22001 PFN2-206ENST00000461930 606 ntTSL 4 BASIC18.64■□□□□ 0.57
KCNA3P22001 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC18.64■□□□□ 0.57
KCNA3P22001 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC18.64■□□□□ 0.57
KCNA3P22001 RBM8B-201ENST00000555532 525 ntBASIC18.64■□□□□ 0.57
KCNA3P22001 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC18.64■□□□□ 0.57
KCNA3P22001 AC008805.1-201ENST00000590892 364 ntBASIC18.64■□□□□ 0.57
KCNA3P22001 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC18.64■□□□□ 0.57
KCNA3P22001 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC18.64■□□□□ 0.57
KCNA3P22001 MIR6858-201ENST00000620733 67 ntBASIC18.64■□□□□ 0.57
KCNA3P22001 AL161773.1-201ENST00000624845 863 ntBASIC18.64■□□□□ 0.57
KCNA3P22001 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
KCNA3P22001 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC18.64■□□□□ 0.57
KCNA3P22001 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.64■□□□□ 0.57
KCNA3P22001 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
KCNA3P22001 FLJ38576-201ENST00000623820 2459 ntBASIC18.64■□□□□ 0.57
KCNA3P22001 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.64■□□□□ 0.57
KCNA3P22001 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
KCNA3P22001 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KCNA3P22001 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
KCNA3P22001 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.64■□□□□ 0.57
KCNA3P22001 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC18.64■□□□□ 0.57
KCNA3P22001 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC18.64■□□□□ 0.57
KCNA3P22001 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNA3P22001 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNA3P22001 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC18.63■□□□□ 0.57
KCNA3P22001 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNA3P22001 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNA3P22001 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNA3P22001 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
KCNA3P22001 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNA3P22001 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KCNA3P22001 RPL8P2-201ENST00000430538 502 ntBASIC18.63■□□□□ 0.57
KCNA3P22001 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KCNA3P22001 BUD31-205ENST00000456893 512 ntTSL 5 BASIC18.63■□□□□ 0.57
KCNA3P22001 AL157792.1-201ENST00000488281 530 ntBASIC18.63■□□□□ 0.57
KCNA3P22001 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC18.63■□□□□ 0.57
KCNA3P22001 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC18.63■□□□□ 0.57
KCNA3P22001 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
KCNA3P22001 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC18.63■□□□□ 0.57
KCNA3P22001 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms