Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMPD1P17405 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.05■□□□□ 0.32
SMPD1P17405 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
SMPD1P17405 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.05■□□□□ 0.32
SMPD1P17405 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMPD1P17405 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.05■□□□□ 0.32
SMPD1P17405 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
SMPD1P17405 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.05■□□□□ 0.32
SMPD1P17405 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.05■□□□□ 0.32
SMPD1P17405 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SMPD1P17405 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMPD1P17405 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.05■□□□□ 0.32
SMPD1P17405 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMPD1P17405 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMPD1P17405 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMPD1P17405 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMPD1P17405 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMPD1P17405 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMPD1P17405 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.04■□□□□ 0.32
SMPD1P17405 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.04■□□□□ 0.32
SMPD1P17405 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMPD1P17405 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMPD1P17405 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMPD1P17405 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMPD1P17405 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.04■□□□□ 0.32
SMPD1P17405 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMPD1P17405 AL136309.1-201ENST00000403917 691 ntBASIC17.04■□□□□ 0.32
SMPD1P17405 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.04■□□□□ 0.32
SMPD1P17405 AL354877.1-201ENST00000424412 413 ntBASIC17.04■□□□□ 0.32
SMPD1P17405 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.04■□□□□ 0.32
SMPD1P17405 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMPD1P17405 UPF3AP2-201ENST00000457924 1132 ntBASIC17.04■□□□□ 0.32
SMPD1P17405 MESTP3-201ENST00000503460 968 ntBASIC17.04■□□□□ 0.32
SMPD1P17405 AC026434.2-201ENST00000506094 1078 ntBASIC17.04■□□□□ 0.32
SMPD1P17405 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SMPD1P17405 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.04■□□□□ 0.32
SMPD1P17405 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMPD1P17405 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMPD1P17405 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMPD1P17405 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SMPD1P17405 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMPD1P17405 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.04■□□□□ 0.32
SMPD1P17405 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.04■□□□□ 0.32
SMPD1P17405 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMPD1P17405 AL157414.3-201ENST00000624276 1954 ntBASIC17.04■□□□□ 0.32
SMPD1P17405 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMPD1P17405 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.04■□□□□ 0.32
SMPD1P17405 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMPD1P17405 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SMPD1P17405 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMPD1P17405 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMPD1P17405 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.03■□□□□ 0.32
SMPD1P17405 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMPD1P17405 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.03■□□□□ 0.32
SMPD1P17405 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMPD1P17405 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMPD1P17405 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMPD1P17405 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMPD1P17405 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMPD1P17405 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SMPD1P17405 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SMPD1P17405 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.03■□□□□ 0.32
SMPD1P17405 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.03■□□□□ 0.32
SMPD1P17405 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.03■□□□□ 0.32
SMPD1P17405 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.03■□□□□ 0.32
SMPD1P17405 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.03■□□□□ 0.32
SMPD1P17405 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMPD1P17405 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMPD1P17405 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.03■□□□□ 0.32
SMPD1P17405 AC016629.1-201ENST00000596579 586 ntBASIC17.03■□□□□ 0.32
SMPD1P17405 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMPD1P17405 MST1L-201ENST00000442552 2185 ntBASIC17.03■□□□□ 0.32
SMPD1P17405 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SMPD1P17405 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMPD1P17405 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMPD1P17405 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SMPD1P17405 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.03■□□□□ 0.32
SMPD1P17405 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SMPD1P17405 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.03■□□□□ 0.32
SMPD1P17405 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.03■□□□□ 0.32
SMPD1P17405 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
SMPD1P17405 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMPD1P17405 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMPD1P17405 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMPD1P17405 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMPD1P17405 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
SMPD1P17405 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMPD1P17405 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMPD1P17405 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.02■□□□□ 0.32
SMPD1P17405 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMPD1P17405 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMPD1P17405 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMPD1P17405 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMPD1P17405 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SMPD1P17405 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMPD1P17405 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMPD1P17405 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMPD1P17405 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.02■□□□□ 0.32
SMPD1P17405 SPTLC1P5-201ENST00000450718 252 ntBASIC17.02■□□□□ 0.32
SMPD1P17405 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms