Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.93□□□□□ -0.34
CTSDP07339 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CTSDP07339 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CTSDP07339 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CTSDP07339 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.93□□□□□ -0.34
CTSDP07339 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CTSDP07339 MRPL3P1-201ENST00000400109 1033 ntBASIC12.93□□□□□ -0.34
CTSDP07339 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CTSDP07339 AL031284.1-201ENST00000419297 478 ntBASIC12.93□□□□□ -0.34
CTSDP07339 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.93□□□□□ -0.34
CTSDP07339 AC009078.2-202ENST00000463353 338 ntBASIC12.93□□□□□ -0.34
CTSDP07339 AC093909.1-201ENST00000504731 1122 ntBASIC12.93□□□□□ -0.34
CTSDP07339 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
CTSDP07339 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.93□□□□□ -0.34
CTSDP07339 AL662844.1-201ENST00000546340 181 ntBASIC12.93□□□□□ -0.34
CTSDP07339 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.93□□□□□ -0.34
CTSDP07339 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CTSDP07339 KLK8-205ENST00000593490 267 ntTSL 3 BASIC12.93□□□□□ -0.34
CTSDP07339 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CTSDP07339 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CTSDP07339 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CTSDP07339 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CTSDP07339 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CTSDP07339 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CTSDP07339 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CTSDP07339 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CTSDP07339 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.93□□□□□ -0.34
CTSDP07339 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CTSDP07339 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.93□□□□□ -0.34
CTSDP07339 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CTSDP07339 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CTSDP07339 MTHFR-210ENST00000641407 2387 ntBASIC12.93□□□□□ -0.34
CTSDP07339 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CTSDP07339 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CTSDP07339 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CTSDP07339 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CTSDP07339 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CTSDP07339 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CTSDP07339 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CTSDP07339 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CTSDP07339 BCAR1-209ENST00000546196 1340 ntBASIC12.92□□□□□ -0.34
CTSDP07339 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CTSDP07339 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.92□□□□□ -0.34
CTSDP07339 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CTSDP07339 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.92□□□□□ -0.34
CTSDP07339 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CTSDP07339 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CTSDP07339 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CTSDP07339 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.92□□□□□ -0.34
CTSDP07339 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CTSDP07339 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
CTSDP07339 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC12.92□□□□□ -0.34
CTSDP07339 FAM220BP-201ENST00000377689 816 ntBASIC12.92□□□□□ -0.34
CTSDP07339 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CTSDP07339 AC002056.1-201ENST00000395613 760 ntBASIC12.92□□□□□ -0.34
CTSDP07339 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.92□□□□□ -0.34
CTSDP07339 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC12.92□□□□□ -0.34
CTSDP07339 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.92□□□□□ -0.34
CTSDP07339 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CTSDP07339 AP001005.1-201ENST00000571755 1248 ntBASIC12.92□□□□□ -0.34
CTSDP07339 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.92□□□□□ -0.34
CTSDP07339 AC026979.3-201ENST00000607315 403 ntBASIC12.92□□□□□ -0.34
CTSDP07339 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.92□□□□□ -0.34
CTSDP07339 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.92□□□□□ -0.34
CTSDP07339 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.92□□□□□ -0.34
CTSDP07339 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
CTSDP07339 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC12.92□□□□□ -0.34
CTSDP07339 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.92□□□□□ -0.34
CTSDP07339 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CTSDP07339 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.92□□□□□ -0.34
CTSDP07339 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.92□□□□□ -0.34
CTSDP07339 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.92□□□□□ -0.34
CTSDP07339 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.92□□□□□ -0.34
CTSDP07339 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CTSDP07339 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.92□□□□□ -0.34
CTSDP07339 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CTSDP07339 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.92□□□□□ -0.34
CTSDP07339 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CTSDP07339 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC12.92□□□□□ -0.34
CTSDP07339 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CTSDP07339 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.92□□□□□ -0.34
CTSDP07339 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CTSDP07339 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CTSDP07339 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CTSDP07339 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CTSDP07339 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CTSDP07339 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.92□□□□□ -0.34
CTSDP07339 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CTSDP07339 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CTSDP07339 LINC01230-201ENST00000625222 3017 ntBASIC12.91□□□□□ -0.34
CTSDP07339 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CTSDP07339 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CTSDP07339 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.91□□□□□ -0.34
CTSDP07339 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CTSDP07339 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CTSDP07339 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.91□□□□□ -0.34
CTSDP07339 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.91□□□□□ -0.34
CTSDP07339 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
CTSDP07339 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CTSDP07339 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms