Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC19.91■□□□□ 0.78
COL5A2P05997 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC19.91■□□□□ 0.78
COL5A2P05997 GMFG-209ENST00000600322 622 ntTSL 5 BASIC19.91■□□□□ 0.78
COL5A2P05997 MIR6720-201ENST00000611664 98 ntBASIC19.91■□□□□ 0.78
COL5A2P05997 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL5A2P05997 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL5A2P05997 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
COL5A2P05997 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL5A2P05997 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC19.9■□□□□ 0.78
COL5A2P05997 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
COL5A2P05997 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL5A2P05997 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL5A2P05997 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL5A2P05997 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
COL5A2P05997 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
COL5A2P05997 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL5A2P05997 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL5A2P05997 AL662844.4-201ENST00000606367 2838 ntBASIC19.9■□□□□ 0.78
COL5A2P05997 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL5A2P05997 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL5A2P05997 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL5A2P05997 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
COL5A2P05997 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.9■□□□□ 0.78
COL5A2P05997 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC19.9■□□□□ 0.78
COL5A2P05997 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
COL5A2P05997 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL5A2P05997 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL5A2P05997 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL5A2P05997 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC19.9■□□□□ 0.78
COL5A2P05997 NAGK-204ENST00000443872 878 ntTSL 3 BASIC19.9■□□□□ 0.78
COL5A2P05997 AC006122.1-201ENST00000493323 440 ntBASIC19.9■□□□□ 0.78
COL5A2P05997 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
COL5A2P05997 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC19.9■□□□□ 0.78
COL5A2P05997 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC19.9■□□□□ 0.78
COL5A2P05997 AC008825.2-201ENST00000603374 718 ntBASIC19.9■□□□□ 0.78
COL5A2P05997 AC103810.10-201ENST00000606504 343 ntBASIC19.9■□□□□ 0.78
COL5A2P05997 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC19.9■□□□□ 0.78
COL5A2P05997 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL5A2P05997 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL5A2P05997 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL5A2P05997 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL5A2P05997 AC092127.1-201ENST00000567093 3455 ntBASIC19.9■□□□□ 0.78
COL5A2P05997 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL5A2P05997 FAM90A2P-201ENST00000511144 1395 ntBASIC19.89■□□□□ 0.78
COL5A2P05997 FAM90A25P-201ENST00000528404 1395 ntBASIC19.89■□□□□ 0.78
COL5A2P05997 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.89■□□□□ 0.78
COL5A2P05997 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
COL5A2P05997 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL5A2P05997 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL5A2P05997 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL5A2P05997 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.89■□□□□ 0.77
COL5A2P05997 PES1-204ENST00000402284 2144 ntTSL 5 BASIC19.89■□□□□ 0.77
COL5A2P05997 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL5A2P05997 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC19.89■□□□□ 0.77
COL5A2P05997 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC19.89■□□□□ 0.77
COL5A2P05997 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC19.89■□□□□ 0.77
COL5A2P05997 AL031713.1-201ENST00000564813 661 ntBASIC19.89■□□□□ 0.77
COL5A2P05997 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL5A2P05997 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC19.89■□□□□ 0.77
COL5A2P05997 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC19.89■□□□□ 0.77
COL5A2P05997 AC005632.3-201ENST00000605544 308 ntBASIC19.89■□□□□ 0.77
COL5A2P05997 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
COL5A2P05997 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
COL5A2P05997 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL5A2P05997 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL5A2P05997 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL5A2P05997 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL5A2P05997 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL5A2P05997 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
COL5A2P05997 ACE-203ENST00000413513 2237 ntTSL 2 BASIC19.88■□□□□ 0.77
COL5A2P05997 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL5A2P05997 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL5A2P05997 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
COL5A2P05997 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC19.88■□□□□ 0.77
COL5A2P05997 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
COL5A2P05997 SOD2-202ENST00000367054 815 ntTSL 2 BASIC19.88■□□□□ 0.77
COL5A2P05997 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL5A2P05997 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL5A2P05997 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
COL5A2P05997 AL645933.1-201ENST00000440087 609 ntBASIC19.88■□□□□ 0.77
COL5A2P05997 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL5A2P05997 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
COL5A2P05997 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC19.88■□□□□ 0.77
COL5A2P05997 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC19.88■□□□□ 0.77
COL5A2P05997 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL5A2P05997 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
COL5A2P05997 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.88■□□□□ 0.77
COL5A2P05997 AL603832.2-201ENST00000566195 2125 ntBASIC19.88■□□□□ 0.77
COL5A2P05997 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL5A2P05997 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
COL5A2P05997 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL5A2P05997 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL5A2P05997 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
COL5A2P05997 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL5A2P05997 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.88■□□□□ 0.77
COL5A2P05997 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC19.88■□□□□ 0.77
COL5A2P05997 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL5A2P05997 CYP51A1P3-201ENST00000400072 1428 ntBASIC19.88■□□□□ 0.77
COL5A2P05997 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
COL5A2P05997 AC006449.5-201ENST00000610658 2098 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms