Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.44□□□□□ -0.42
APOC3P02656 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
APOC3P02656 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
APOC3P02656 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.44□□□□□ -0.42
APOC3P02656 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
APOC3P02656 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
APOC3P02656 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
APOC3P02656 WDR53-204ENST00000433160 887 ntTSL 5 BASIC12.44□□□□□ -0.42
APOC3P02656 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC12.44□□□□□ -0.42
APOC3P02656 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.44□□□□□ -0.42
APOC3P02656 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC12.44□□□□□ -0.42
APOC3P02656 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC12.44□□□□□ -0.42
APOC3P02656 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.44□□□□□ -0.42
APOC3P02656 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC12.44□□□□□ -0.42
APOC3P02656 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.44□□□□□ -0.42
APOC3P02656 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12.44□□□□□ -0.42
APOC3P02656 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC12.44□□□□□ -0.42
APOC3P02656 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.44□□□□□ -0.42
APOC3P02656 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 AL445209.1-201ENST00000607269 3491 ntBASIC12.44□□□□□ -0.42
APOC3P02656 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC12.44□□□□□ -0.42
APOC3P02656 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
APOC3P02656 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.44□□□□□ -0.42
APOC3P02656 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.44□□□□□ -0.42
APOC3P02656 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
APOC3P02656 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC3P02656 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
APOC3P02656 CICP1-201ENST00000416803 2410 ntBASIC12.43□□□□□ -0.42
APOC3P02656 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
APOC3P02656 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
APOC3P02656 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
APOC3P02656 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
APOC3P02656 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.43□□□□□ -0.42
APOC3P02656 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOC3P02656 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
APOC3P02656 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC12.43□□□□□ -0.42
APOC3P02656 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.43□□□□□ -0.42
APOC3P02656 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
APOC3P02656 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
APOC3P02656 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.43□□□□□ -0.42
APOC3P02656 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC12.43□□□□□ -0.42
APOC3P02656 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
APOC3P02656 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.43□□□□□ -0.42
APOC3P02656 BX324167.2-201ENST00000623717 3316 ntBASIC12.43□□□□□ -0.42
APOC3P02656 MAPK10-262ENST00000641051 5738 ntBASIC12.43□□□□□ -0.42
APOC3P02656 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOC3P02656 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
APOC3P02656 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOC3P02656 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
APOC3P02656 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC12.43□□□□□ -0.42
APOC3P02656 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOC3P02656 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOC3P02656 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC12.43□□□□□ -0.42
APOC3P02656 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.43□□□□□ -0.42
APOC3P02656 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
APOC3P02656 AL355802.2-201ENST00000402069 882 ntBASIC12.43□□□□□ -0.42
APOC3P02656 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC12.43□□□□□ -0.42
APOC3P02656 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC12.43□□□□□ -0.42
APOC3P02656 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
APOC3P02656 KLF4P1-201ENST00000412782 1185 ntBASIC12.43□□□□□ -0.42
APOC3P02656 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC12.43□□□□□ -0.42
APOC3P02656 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC12.43□□□□□ -0.42
APOC3P02656 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
APOC3P02656 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
APOC3P02656 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
APOC3P02656 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC12.43□□□□□ -0.42
APOC3P02656 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC12.43□□□□□ -0.42
APOC3P02656 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC12.43□□□□□ -0.42
APOC3P02656 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
APOC3P02656 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
APOC3P02656 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC12.43□□□□□ -0.42
APOC3P02656 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
APOC3P02656 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
APOC3P02656 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOC3P02656 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms