Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQA2P01906 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQA2P01906 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQA2P01906 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQA2P01906 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14□□□□□ -0.17
HLA-DQA2P01906 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14□□□□□ -0.17
HLA-DQA2P01906 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQA2P01906 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQA2P01906 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQA2P01906 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQA2P01906 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQA2P01906 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQA2P01906 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14□□□□□ -0.17
HLA-DQA2P01906 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQA2P01906 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQA2P01906 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQA2P01906 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQA2P01906 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQA2P01906 AZGP1P1-201ENST00000411909 902 ntBASIC14□□□□□ -0.17
HLA-DQA2P01906 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14□□□□□ -0.17
HLA-DQA2P01906 MTND6P24-201ENST00000440466 518 ntBASIC14□□□□□ -0.17
HLA-DQA2P01906 EEF1DP4-201ENST00000446006 880 ntBASIC14□□□□□ -0.17
HLA-DQA2P01906 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQA2P01906 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14□□□□□ -0.17
HLA-DQA2P01906 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14□□□□□ -0.17
HLA-DQA2P01906 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HLA-DQA2P01906 HNRNPUP1-201ENST00000554987 333 ntBASIC14□□□□□ -0.17
HLA-DQA2P01906 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14□□□□□ -0.17
HLA-DQA2P01906 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14□□□□□ -0.17
HLA-DQA2P01906 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQA2P01906 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQA2P01906 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14□□□□□ -0.17
HLA-DQA2P01906 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14□□□□□ -0.17
HLA-DQA2P01906 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14□□□□□ -0.17
HLA-DQA2P01906 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14□□□□□ -0.17
HLA-DQA2P01906 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQA2P01906 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14□□□□□ -0.17
HLA-DQA2P01906 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
HLA-DQA2P01906 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14□□□□□ -0.17
HLA-DQA2P01906 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQA2P01906 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14□□□□□ -0.17
HLA-DQA2P01906 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
HLA-DQA2P01906 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQA2P01906 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14□□□□□ -0.17
HLA-DQA2P01906 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQA2P01906 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQA2P01906 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQA2P01906 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQA2P01906 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQA2P01906 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQA2P01906 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14□□□□□ -0.17
HLA-DQA2P01906 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.99□□□□□ -0.17
HLA-DQA2P01906 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 AL627223.1-201ENST00000416693 442 ntBASIC13.99□□□□□ -0.17
HLA-DQA2P01906 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 AL607033.1-201ENST00000623900 1599 ntBASIC13.99□□□□□ -0.17
HLA-DQA2P01906 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQA2P01906 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
HLA-DQA2P01906 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DQA2P01906 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms