Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PDGFBP01127 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.36■□□□□ 0.05
PDGFBP01127 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PDGFBP01127 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.36■□□□□ 0.05
PDGFBP01127 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.36■□□□□ 0.05
PDGFBP01127 AC092171.3-201ENST00000610122 2651 ntBASIC15.36■□□□□ 0.05
PDGFBP01127 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
PDGFBP01127 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PDGFBP01127 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDGFBP01127 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PDGFBP01127 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PDGFBP01127 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC15.35■□□□□ 0.05
PDGFBP01127 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFBP01127 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.35■□□□□ 0.05
PDGFBP01127 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFBP01127 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFBP01127 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFBP01127 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFBP01127 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFBP01127 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.35■□□□□ 0.05
PDGFBP01127 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFBP01127 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFBP01127 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFBP01127 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFBP01127 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
PDGFBP01127 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFBP01127 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFBP01127 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFBP01127 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
PDGFBP01127 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFBP01127 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.35■□□□□ 0.05
PDGFBP01127 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
PDGFBP01127 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.35■□□□□ 0.05
PDGFBP01127 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.35■□□□□ 0.05
PDGFBP01127 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFBP01127 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFBP01127 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
PDGFBP01127 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC15.35■□□□□ 0.05
PDGFBP01127 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.35■□□□□ 0.05
PDGFBP01127 VDAC1P1-201ENST00000439229 848 ntBASIC15.35■□□□□ 0.05
PDGFBP01127 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.35■□□□□ 0.05
PDGFBP01127 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFBP01127 HLA-J-204ENST00000495278 958 ntBASIC15.35■□□□□ 0.05
PDGFBP01127 REEP5-205ENST00000504247 480 ntTSL 5 BASIC15.35■□□□□ 0.05
PDGFBP01127 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC15.35■□□□□ 0.05
PDGFBP01127 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC15.35■□□□□ 0.05
PDGFBP01127 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.35■□□□□ 0.05
PDGFBP01127 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.35■□□□□ 0.05
PDGFBP01127 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.35■□□□□ 0.05
PDGFBP01127 AC008805.1-201ENST00000590892 364 ntBASIC15.35■□□□□ 0.05
PDGFBP01127 AP003392.6-201ENST00000607709 325 ntBASIC15.35■□□□□ 0.05
PDGFBP01127 AP001527.2-201ENST00000614441 631 ntBASIC15.35■□□□□ 0.05
PDGFBP01127 AC138466.4-201ENST00000623965 852 ntBASIC15.35■□□□□ 0.05
PDGFBP01127 AL132780.4-201ENST00000624870 1135 ntBASIC15.35■□□□□ 0.05
PDGFBP01127 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.35■□□□□ 0.05
PDGFBP01127 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFBP01127 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFBP01127 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFBP01127 FKBP4P6-201ENST00000457486 1332 ntBASIC15.35■□□□□ 0.05
PDGFBP01127 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.35■□□□□ 0.05
PDGFBP01127 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFBP01127 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.35■□□□□ 0.05
PDGFBP01127 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
PDGFBP01127 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFBP01127 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFBP01127 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFBP01127 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.34■□□□□ 0.05
PDGFBP01127 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.34■□□□□ 0.05
PDGFBP01127 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFBP01127 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.34■□□□□ 0.05
PDGFBP01127 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.34■□□□□ 0.05
PDGFBP01127 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
PDGFBP01127 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFBP01127 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFBP01127 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFBP01127 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
PDGFBP01127 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFBP01127 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.34■□□□□ 0.05
PDGFBP01127 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFBP01127 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFBP01127 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC15.34■□□□□ 0.05
PDGFBP01127 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC15.34■□□□□ 0.05
PDGFBP01127 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFBP01127 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.34■□□□□ 0.05
PDGFBP01127 MESTP3-201ENST00000503460 968 ntBASIC15.34■□□□□ 0.05
PDGFBP01127 POU5F1P2-201ENST00000521750 823 ntBASIC15.34■□□□□ 0.05
PDGFBP01127 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFBP01127 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC15.34■□□□□ 0.05
PDGFBP01127 AL022344.2-201ENST00000568976 968 ntBASIC15.34■□□□□ 0.05
PDGFBP01127 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.34■□□□□ 0.05
PDGFBP01127 MIR6858-201ENST00000620733 67 ntBASIC15.34■□□□□ 0.05
PDGFBP01127 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.34■□□□□ 0.05
PDGFBP01127 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFBP01127 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFBP01127 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.34■□□□□ 0.05
PDGFBP01127 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFBP01127 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFBP01127 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFBP01127 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
PDGFBP01127 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms