Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TIMP1P01033 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TIMP1P01033 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.47■□□□□ 0.23
TIMP1P01033 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
TIMP1P01033 REXO1L5P-201ENST00000622260 2098 ntBASIC16.47■□□□□ 0.23
TIMP1P01033 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TIMP1P01033 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TIMP1P01033 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.47■□□□□ 0.23
TIMP1P01033 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.47■□□□□ 0.23
TIMP1P01033 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.47■□□□□ 0.23
TIMP1P01033 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TIMP1P01033 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TIMP1P01033 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TIMP1P01033 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TIMP1P01033 AC239868.1-201ENST00000369385 493 ntBASIC16.47■□□□□ 0.23
TIMP1P01033 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.47■□□□□ 0.23
TIMP1P01033 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TIMP1P01033 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TIMP1P01033 HPGD-203ENST00000422112 805 ntTSL 2 BASIC16.47■□□□□ 0.23
TIMP1P01033 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.47■□□□□ 0.23
TIMP1P01033 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC16.47■□□□□ 0.23
TIMP1P01033 AC012441.2-201ENST00000444843 739 ntBASIC16.47■□□□□ 0.23
TIMP1P01033 RN7SL258P-201ENST00000478664 300 ntBASIC16.47■□□□□ 0.23
TIMP1P01033 DNM1P30-201ENST00000563586 452 ntBASIC16.47■□□□□ 0.23
TIMP1P01033 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.47■□□□□ 0.23
TIMP1P01033 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.47■□□□□ 0.23
TIMP1P01033 MIR6842-201ENST00000612539 65 ntBASIC16.47■□□□□ 0.23
TIMP1P01033 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.47■□□□□ 0.23
TIMP1P01033 YRDCP1-201ENST00000621419 643 ntBASIC16.47■□□□□ 0.23
TIMP1P01033 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TIMP1P01033 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TIMP1P01033 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.47■□□□□ 0.23
TIMP1P01033 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TIMP1P01033 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TIMP1P01033 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TIMP1P01033 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TIMP1P01033 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.46■□□□□ 0.23
TIMP1P01033 AC074138.1-201ENST00000611182 1303 ntBASIC16.46■□□□□ 0.23
TIMP1P01033 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TIMP1P01033 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TIMP1P01033 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.46■□□□□ 0.23
TIMP1P01033 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TIMP1P01033 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.46■□□□□ 0.23
TIMP1P01033 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TIMP1P01033 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TIMP1P01033 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TIMP1P01033 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TIMP1P01033 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.46■□□□□ 0.23
TIMP1P01033 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TIMP1P01033 RPS9P1-201ENST00000419943 583 ntBASIC16.46■□□□□ 0.23
TIMP1P01033 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC16.46■□□□□ 0.23
TIMP1P01033 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TIMP1P01033 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.46■□□□□ 0.23
TIMP1P01033 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC16.46■□□□□ 0.23
TIMP1P01033 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.46■□□□□ 0.23
TIMP1P01033 CTBP2P4-201ENST00000513884 920 ntBASIC16.46■□□□□ 0.23
TIMP1P01033 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TIMP1P01033 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.46■□□□□ 0.23
TIMP1P01033 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC16.46■□□□□ 0.23
TIMP1P01033 GMFG-209ENST00000600322 622 ntTSL 5 BASIC16.46■□□□□ 0.23
TIMP1P01033 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TIMP1P01033 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TIMP1P01033 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.46■□□□□ 0.23
TIMP1P01033 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TIMP1P01033 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TIMP1P01033 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TIMP1P01033 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TIMP1P01033 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TIMP1P01033 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TIMP1P01033 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TIMP1P01033 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TIMP1P01033 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.46■□□□□ 0.22
TIMP1P01033 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TIMP1P01033 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
TIMP1P01033 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
TIMP1P01033 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TIMP1P01033 AL596087.1-201ENST00000400979 1969 ntBASIC16.46■□□□□ 0.22
TIMP1P01033 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TIMP1P01033 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.45■□□□□ 0.22
TIMP1P01033 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.45■□□□□ 0.22
TIMP1P01033 CYP51A1P3-201ENST00000400072 1428 ntBASIC16.45■□□□□ 0.22
TIMP1P01033 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
TIMP1P01033 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TIMP1P01033 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TIMP1P01033 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.45■□□□□ 0.22
TIMP1P01033 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TIMP1P01033 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TIMP1P01033 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TIMP1P01033 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.45■□□□□ 0.22
TIMP1P01033 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TIMP1P01033 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TIMP1P01033 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.45■□□□□ 0.22
TIMP1P01033 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
TIMP1P01033 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TIMP1P01033 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TIMP1P01033 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TIMP1P01033 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TIMP1P01033 KRT18P66-201ENST00000452970 1269 ntBASIC16.45■□□□□ 0.22
TIMP1P01033 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.45■□□□□ 0.22
TIMP1P01033 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms