Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.22□□□□□ -0.45
TOMM40O96008 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TOMM40O96008 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.22□□□□□ -0.45
TOMM40O96008 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.22□□□□□ -0.45
TOMM40O96008 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TOMM40O96008 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TOMM40O96008 AC097376.2-205ENST00000610159 5334 ntBASIC12.22□□□□□ -0.45
TOMM40O96008 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TOMM40O96008 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TOMM40O96008 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TOMM40O96008 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.22□□□□□ -0.45
TOMM40O96008 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.22□□□□□ -0.45
TOMM40O96008 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TOMM40O96008 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TOMM40O96008 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.22□□□□□ -0.45
TOMM40O96008 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TOMM40O96008 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TOMM40O96008 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TOMM40O96008 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TOMM40O96008 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TOMM40O96008 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.22□□□□□ -0.45
TOMM40O96008 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TOMM40O96008 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TOMM40O96008 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TOMM40O96008 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.21□□□□□ -0.45
TOMM40O96008 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.21□□□□□ -0.45
TOMM40O96008 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.21□□□□□ -0.45
TOMM40O96008 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TOMM40O96008 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
TOMM40O96008 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.21□□□□□ -0.45
TOMM40O96008 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
TOMM40O96008 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TOMM40O96008 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.21□□□□□ -0.45
TOMM40O96008 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TOMM40O96008 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
TOMM40O96008 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TOMM40O96008 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.21□□□□□ -0.45
TOMM40O96008 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
TOMM40O96008 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.21□□□□□ -0.45
TOMM40O96008 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TOMM40O96008 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.21□□□□□ -0.45
TOMM40O96008 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.21□□□□□ -0.45
TOMM40O96008 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TOMM40O96008 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
TOMM40O96008 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.21□□□□□ -0.45
TOMM40O96008 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TOMM40O96008 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TOMM40O96008 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TOMM40O96008 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.21□□□□□ -0.45
TOMM40O96008 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TOMM40O96008 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TOMM40O96008 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TOMM40O96008 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
TOMM40O96008 RPL5P21-201ENST00000404620 815 ntBASIC12.21□□□□□ -0.45
TOMM40O96008 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
TOMM40O96008 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.21□□□□□ -0.45
TOMM40O96008 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.21□□□□□ -0.45
TOMM40O96008 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TOMM40O96008 AC005237.2-201ENST00000434368 219 ntBASIC12.21□□□□□ -0.45
TOMM40O96008 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.21□□□□□ -0.45
TOMM40O96008 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TOMM40O96008 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.21□□□□□ -0.45
TOMM40O96008 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.21□□□□□ -0.45
TOMM40O96008 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TOMM40O96008 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.21□□□□□ -0.45
TOMM40O96008 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.21□□□□□ -0.45
TOMM40O96008 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TOMM40O96008 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
TOMM40O96008 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TOMM40O96008 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TOMM40O96008 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TOMM40O96008 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.21□□□□□ -0.45
TOMM40O96008 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TOMM40O96008 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TOMM40O96008 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TOMM40O96008 AL607033.1-201ENST00000623900 1599 ntBASIC12.21□□□□□ -0.46
TOMM40O96008 ELL2P1-201ENST00000413990 1906 ntBASIC12.21□□□□□ -0.46
TOMM40O96008 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
TOMM40O96008 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TOMM40O96008 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.21□□□□□ -0.46
TOMM40O96008 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TOMM40O96008 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TOMM40O96008 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
TOMM40O96008 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
TOMM40O96008 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.21□□□□□ -0.46
TOMM40O96008 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.46
TOMM40O96008 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TOMM40O96008 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TOMM40O96008 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TOMM40O96008 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TOMM40O96008 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
TOMM40O96008 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TOMM40O96008 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.2□□□□□ -0.46
TOMM40O96008 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.2□□□□□ -0.46
TOMM40O96008 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TOMM40O96008 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.2□□□□□ -0.46
TOMM40O96008 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.2□□□□□ -0.46
TOMM40O96008 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.2□□□□□ -0.46
TOMM40O96008 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
TOMM40O96008 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms