Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
OPHN1O60890 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
OPHN1O60890 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
OPHN1O60890 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.27■□□□□ 0.2
OPHN1O60890 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
OPHN1O60890 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
OPHN1O60890 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
OPHN1O60890 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
OPHN1O60890 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
OPHN1O60890 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
OPHN1O60890 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
OPHN1O60890 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
OPHN1O60890 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
OPHN1O60890 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
OPHN1O60890 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.27■□□□□ 0.2
OPHN1O60890 AP006294.1-201ENST00000415407 339 ntBASIC16.27■□□□□ 0.2
OPHN1O60890 MTND6P24-201ENST00000440466 518 ntBASIC16.27■□□□□ 0.2
OPHN1O60890 PHKG1P2-201ENST00000457537 863 ntBASIC16.27■□□□□ 0.2
OPHN1O60890 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
OPHN1O60890 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.27■□□□□ 0.2
OPHN1O60890 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.27■□□□□ 0.2
OPHN1O60890 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.27■□□□□ 0.2
OPHN1O60890 TEX28P1-201ENST00000613479 1221 ntBASIC16.27■□□□□ 0.2
OPHN1O60890 TEX28P2-201ENST00000617764 1221 ntBASIC16.27■□□□□ 0.2
OPHN1O60890 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.27■□□□□ 0.2
OPHN1O60890 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
OPHN1O60890 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
OPHN1O60890 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.27■□□□□ 0.19
OPHN1O60890 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
OPHN1O60890 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.27■□□□□ 0.19
OPHN1O60890 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
OPHN1O60890 AC013268.4-201ENST00000637413 2228 ntBASIC16.27■□□□□ 0.19
OPHN1O60890 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
OPHN1O60890 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.27■□□□□ 0.19
OPHN1O60890 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
OPHN1O60890 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
OPHN1O60890 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
OPHN1O60890 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
OPHN1O60890 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
OPHN1O60890 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
OPHN1O60890 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
OPHN1O60890 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
OPHN1O60890 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.27■□□□□ 0.19
OPHN1O60890 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
OPHN1O60890 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.19
OPHN1O60890 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
OPHN1O60890 AC092127.1-201ENST00000567093 3455 ntBASIC16.27■□□□□ 0.19
OPHN1O60890 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
OPHN1O60890 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.26■□□□□ 0.19
OPHN1O60890 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
OPHN1O60890 AC097376.2-205ENST00000610159 5334 ntBASIC16.26■□□□□ 0.19
OPHN1O60890 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
OPHN1O60890 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.26■□□□□ 0.19
OPHN1O60890 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.26■□□□□ 0.19
OPHN1O60890 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.26■□□□□ 0.19
OPHN1O60890 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
OPHN1O60890 AC090616.6-203ENST00000579186 1945 ntBASIC16.26■□□□□ 0.19
OPHN1O60890 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.26■□□□□ 0.19
OPHN1O60890 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.26■□□□□ 0.19
OPHN1O60890 AC087499.6-201ENST00000411576 835 ntBASIC16.26■□□□□ 0.19
OPHN1O60890 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.26■□□□□ 0.19
OPHN1O60890 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.26■□□□□ 0.19
OPHN1O60890 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.26■□□□□ 0.19
OPHN1O60890 RN7SL752P-201ENST00000463779 287 ntBASIC16.26■□□□□ 0.19
OPHN1O60890 AC011495.1-201ENST00000498085 584 ntBASIC16.26■□□□□ 0.19
OPHN1O60890 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
OPHN1O60890 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
OPHN1O60890 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.26■□□□□ 0.19
OPHN1O60890 AC009407.1-201ENST00000568958 598 ntBASIC16.26■□□□□ 0.19
OPHN1O60890 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.26■□□□□ 0.19
OPHN1O60890 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.26■□□□□ 0.19
OPHN1O60890 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
OPHN1O60890 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
OPHN1O60890 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
OPHN1O60890 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
OPHN1O60890 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
OPHN1O60890 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
OPHN1O60890 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
OPHN1O60890 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
OPHN1O60890 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
OPHN1O60890 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
OPHN1O60890 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
OPHN1O60890 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.26■□□□□ 0.19
OPHN1O60890 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
OPHN1O60890 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
OPHN1O60890 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.26■□□□□ 0.19
OPHN1O60890 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
OPHN1O60890 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
OPHN1O60890 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
OPHN1O60890 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.26■□□□□ 0.19
OPHN1O60890 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
OPHN1O60890 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.26■□□□□ 0.19
OPHN1O60890 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
OPHN1O60890 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
OPHN1O60890 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
OPHN1O60890 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
OPHN1O60890 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.25■□□□□ 0.19
OPHN1O60890 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
OPHN1O60890 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.25■□□□□ 0.19
OPHN1O60890 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms