Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
XRCC2O43543 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
XRCC2O43543 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.55□□□□□ -0.24
XRCC2O43543 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
XRCC2O43543 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.55□□□□□ -0.24
XRCC2O43543 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
XRCC2O43543 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
XRCC2O43543 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
XRCC2O43543 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.55□□□□□ -0.24
XRCC2O43543 AC148477.4-201ENST00000613430 1793 ntBASIC13.55□□□□□ -0.24
XRCC2O43543 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.55□□□□□ -0.24
XRCC2O43543 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
XRCC2O43543 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
XRCC2O43543 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.55□□□□□ -0.24
XRCC2O43543 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
XRCC2O43543 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
XRCC2O43543 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
XRCC2O43543 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
XRCC2O43543 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
XRCC2O43543 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
XRCC2O43543 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.54□□□□□ -0.24
XRCC2O43543 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
XRCC2O43543 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
XRCC2O43543 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
XRCC2O43543 AC084364.1-201ENST00000551967 1556 ntBASIC13.54□□□□□ -0.24
XRCC2O43543 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.54□□□□□ -0.24
XRCC2O43543 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
XRCC2O43543 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
XRCC2O43543 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
XRCC2O43543 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
XRCC2O43543 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
XRCC2O43543 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
XRCC2O43543 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
XRCC2O43543 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
XRCC2O43543 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
XRCC2O43543 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
XRCC2O43543 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
XRCC2O43543 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
XRCC2O43543 AL133267.1-201ENST00000398220 340 ntBASIC13.54□□□□□ -0.24
XRCC2O43543 AC015922.1-201ENST00000421102 1152 ntBASIC13.54□□□□□ -0.24
XRCC2O43543 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.54□□□□□ -0.24
XRCC2O43543 SDHAP3-202ENST00000515467 728 ntBASIC13.54□□□□□ -0.24
XRCC2O43543 AC027369.6-201ENST00000525520 931 ntBASIC13.54□□□□□ -0.24
XRCC2O43543 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
XRCC2O43543 AL512361.1-201ENST00000554200 418 ntBASIC13.54□□□□□ -0.24
XRCC2O43543 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.54□□□□□ -0.24
XRCC2O43543 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.54□□□□□ -0.24
XRCC2O43543 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
XRCC2O43543 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.54□□□□□ -0.24
XRCC2O43543 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.54□□□□□ -0.24
XRCC2O43543 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
XRCC2O43543 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.54□□□□□ -0.24
XRCC2O43543 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
XRCC2O43543 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
XRCC2O43543 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
XRCC2O43543 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
XRCC2O43543 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.54□□□□□ -0.24
XRCC2O43543 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.54□□□□□ -0.24
XRCC2O43543 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
XRCC2O43543 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.54□□□□□ -0.24
XRCC2O43543 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.54□□□□□ -0.24
XRCC2O43543 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
XRCC2O43543 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
XRCC2O43543 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
XRCC2O43543 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
XRCC2O43543 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
XRCC2O43543 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
XRCC2O43543 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
XRCC2O43543 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.54□□□□□ -0.24
XRCC2O43543 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
XRCC2O43543 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
XRCC2O43543 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
XRCC2O43543 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
XRCC2O43543 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.53□□□□□ -0.24
XRCC2O43543 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
XRCC2O43543 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.53□□□□□ -0.24
XRCC2O43543 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
XRCC2O43543 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
XRCC2O43543 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
XRCC2O43543 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
XRCC2O43543 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
XRCC2O43543 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
XRCC2O43543 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
XRCC2O43543 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
XRCC2O43543 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
XRCC2O43543 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
XRCC2O43543 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.53□□□□□ -0.24
XRCC2O43543 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
XRCC2O43543 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.53□□□□□ -0.24
XRCC2O43543 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.53□□□□□ -0.24
XRCC2O43543 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
XRCC2O43543 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
XRCC2O43543 AC010336.2-201ENST00000564226 506 ntBASIC13.53□□□□□ -0.24
XRCC2O43543 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.53□□□□□ -0.24
XRCC2O43543 AC015910.1-201ENST00000579400 975 ntBASIC13.53□□□□□ -0.24
XRCC2O43543 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
XRCC2O43543 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
XRCC2O43543 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.53□□□□□ -0.24
XRCC2O43543 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.53□□□□□ -0.24
XRCC2O43543 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 542 ms