Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM38O00635 MIR8072-201ENST00000614241 80 ntBASIC15.67■□□□□ 0.1
TRIM38O00635 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM38O00635 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM38O00635 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRIM38O00635 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM38O00635 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM38O00635 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM38O00635 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM38O00635 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM38O00635 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM38O00635 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM38O00635 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM38O00635 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM38O00635 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM38O00635 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
TRIM38O00635 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM38O00635 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM38O00635 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.66■□□□□ 0.1
TRIM38O00635 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM38O00635 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TRIM38O00635 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
TRIM38O00635 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRIM38O00635 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM38O00635 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRIM38O00635 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM38O00635 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM38O00635 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM38O00635 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM38O00635 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM38O00635 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM38O00635 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM38O00635 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM38O00635 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRIM38O00635 FO393414.2-201ENST00000405153 598 ntBASIC15.66■□□□□ 0.1
TRIM38O00635 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM38O00635 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM38O00635 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM38O00635 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM38O00635 TIMM17BP1-201ENST00000545713 516 ntBASIC15.66■□□□□ 0.1
TRIM38O00635 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM38O00635 MIR4321-201ENST00000592276 80 ntBASIC15.66■□□□□ 0.1
TRIM38O00635 AL512343.1-201ENST00000605837 169 ntBASIC15.66■□□□□ 0.1
TRIM38O00635 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.66■□□□□ 0.1
TRIM38O00635 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM38O00635 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM38O00635 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM38O00635 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM38O00635 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM38O00635 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.66■□□□□ 0.1
TRIM38O00635 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.66■□□□□ 0.1
TRIM38O00635 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.66■□□□□ 0.1
TRIM38O00635 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRIM38O00635 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM38O00635 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM38O00635 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM38O00635 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM38O00635 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
TRIM38O00635 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM38O00635 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM38O00635 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TRIM38O00635 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM38O00635 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM38O00635 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.66■□□□□ 0.1
TRIM38O00635 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
TRIM38O00635 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM38O00635 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM38O00635 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM38O00635 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM38O00635 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM38O00635 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM38O00635 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM38O00635 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM38O00635 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM38O00635 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM38O00635 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM38O00635 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TRIM38O00635 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM38O00635 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM38O00635 AL592424.1-201ENST00000563624 1536 ntBASIC15.65■□□□□ 0.1
TRIM38O00635 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM38O00635 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM38O00635 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.65■□□□□ 0.1
TRIM38O00635 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM38O00635 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM38O00635 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM38O00635 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM38O00635 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM38O00635 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM38O00635 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM38O00635 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TRIM38O00635 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
TRIM38O00635 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM38O00635 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.65■□□□□ 0.1
TRIM38O00635 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM38O00635 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM38O00635 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM38O00635 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.65■□□□□ 0.1
TRIM38O00635 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.65■□□□□ 0.1
TRIM38O00635 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms